Pairwise Alignments

Query, 324 a.a., methyl-accepting chemotaxis protein, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 554 a.a., methyl-accepting chemotaxis protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 57.8 bits (138), Expect = 6e-13
 Identities = 39/123 (31%), Positives = 63/123 (51%), Gaps = 4/123 (3%)

Query: 206 RTQQATGEIQKVQSR----VAETDSVMQASQTLSNQGVNRSEEIKLVLSKVTDLVSNISN 261
           RTQ +T EI ++ S     V++    M  SQ    + V  S  I   L  VT  V+ I++
Sbjct: 432 RTQASTLEINEMLSALHKLVSQAVKTMDESQQSCVRSVESSRAISESLGSVTSAVTAIND 491

Query: 262 MNIEVSHAAQEQTCVTEAISRTLNDLANVSGSASLDSEHLAQSSERLFHQGERLRALVTS 321
           M+ +++ AA EQ+ VTE I+R +  +  +       SEH A+ S+ +  +G  L  LV  
Sbjct: 492 MSTQIATAATEQSSVTEEINRNVYAIQEIVNELLHSSEHAARVSQTVSQEGTNLGNLVGQ 551

Query: 322 FRL 324
           F++
Sbjct: 552 FKI 554



 Score = 37.7 bits (86), Expect = 7e-07
 Identities = 34/151 (22%), Positives = 75/151 (49%), Gaps = 14/151 (9%)

Query: 175 QVPAQLKETEAAVTVISQLSASANDIVINTIR----TQQATGEIQKVQSRV-AETDSVMQ 229
           Q+ +   ET+  VT I+++S++A+++  NT +    TQ ATG++   Q  V A  + +  
Sbjct: 303 QLLSHNNETDQVVTAITEMSSTASEVAQNTTQVAEATQAATGDVANAQRCVDASLEEIAA 362

Query: 230 ASQTLSNQG------VNRSEEIKLVLSKVTDLV--SNISNMNIEVSHA-AQEQTCVTEAI 280
             + +++          +S++I  VLS +  +   +N+  +N  +  A A EQ      +
Sbjct: 363 LMEQINHAAGSIKSLSEQSQKINSVLSVIGGIAEQTNLLALNAAIEAARAGEQGRGFAVV 422

Query: 281 SRTLNDLANVSGSASLDSEHLAQSSERLFHQ 311
           +  +  LA+ + +++L+   +  +  +L  Q
Sbjct: 423 ADEVRSLASRTQASTLEINEMLSALHKLVSQ 453