Pairwise Alignments

Query, 896 a.a., beta-hexosaminidase b precursor (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 639 a.a., beta-N-acetylhexosaminidase from Agrobacterium fabrum C58

 Score =  194 bits (494), Expect = 1e-53
 Identities = 154/522 (29%), Positives = 244/522 (46%), Gaps = 84/522 (16%)

Query: 272 KQSFKTDQVAAALERLARLG-----VKESEQGLVMKLSWRQGAEGS-YLLDIKPDGIKIA 325
           +++   + V +   RL  +G     +    +G  ++     G E   Y +    + + + 
Sbjct: 174 EEALAVETVLSLFRRLFAVGHVPFSLAPVHEGKPLRFKQHSGLEAEGYRIAFSNEAVTVE 233

Query: 326 AGDAAGFSYALSSLTSL-----IDVQDLRVNAMTIEDSPRYPFRGMHIDVARNFHSKAMI 380
              AAG  Y L+ L  L     ID +     + TI D+PRY +RG H+DV+R F+    +
Sbjct: 234 YSAAAGLQYGLTVLAQLLHGARIDPKFRFPASGTISDAPRYSWRGCHLDVSRQFYPTDDV 293

Query: 381 FALIDQMAAYKLNKLHLHMADDEGWRLEIDGLPELTDIGSKRCHDLEENTCLLPQLGSGP 440
             LID +A  ++N+ H H+ DDE WRLEI   P LT +G+ R  D      LLPQLG+G 
Sbjct: 294 LRLIDILAWLRMNRFHWHLTDDEAWRLEIKAYPLLTTVGATRGPD----GPLLPQLGNG- 348

Query: 441 FAESSVNGFYSKQDYIDILKYANARQIQVIPSMDMPGHSRAAIKSMEARYRKLLAQGKPT 500
                V+G+Y++ +   ++ +A A  ++++P +D+PGHS AA          L+A  + T
Sbjct: 349 --AEPVSGYYTQDNVRLVVAHAAALNVEIVPEVDIPGHSTAA----------LVAYPELT 396

Query: 501 EAKTYLLSDAADTTVYSSVQYYNDNTLNVCMESTYQFVDKVIDEIAKLHQAAGQPLTRYH 560
           + +     +A D+  Y SVQ Y +N LN  +E TY+F+ K+ DE+ +L      P    H
Sbjct: 397 DGQ-----EAPDS--YRSVQGYPNNALNPAIEPTYEFLGKIFDEMVELF-----PSRLIH 444

Query: 561 IGADETA-GAWKQSPECLSFVANNDKGVKSIEDLGAYFIERISNQLAEKGIEAAGWSDGM 619
           IG DE A G+W  SP  L+    + +G+     + +YF++RI   L E+G + AGW D +
Sbjct: 445 IGGDEVADGSWLASP--LAKALMDKEGLDGTFGIQSYFMKRIQGMLHERGRQLAGW-DEV 501

Query: 620 SHVRPSYMPAKVQSNIWDVIAYKGYEHANQQVNNGWDVVLSNPEVLYFDFPYEADPKEHG 679
           SH      PA      W      G E A Q    G+DVV++  +  Y D   +   +E G
Sbjct: 502 SH-GGGVDPAGTLLMAWQK-PEVGLELARQ----GYDVVMTPGQAYYLDMVQDEAWQEPG 555

Query: 680 YYWASRATNAHKVFSFMPDNLVANAEQWTDLQNLPFEADDRARTDEKGKKSGPREQGKNF 739
             WA     +H                +  + + P E  +R +                 
Sbjct: 556 ASWAGTVPPSH-------------TYAYEAVGDFPDELKERMK----------------- 585

Query: 740 AGLQGQLWSETIRSNDTVEYMIFPRLLMLAERAW---HQAEW 778
            G+Q  +WSE   +     +++FPRL  +AE AW    Q +W
Sbjct: 586 -GVQACIWSEHFLNRAYFNHLVFPRLPAIAEAAWTPKAQKDW 626