Pairwise Alignments

Query, 435 a.a., N-acetyl glucosamine transporter, NagP (from data) from Shewanella oneidensis MR-1

Subject, 424 a.a., sugar MFS transporter from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  147 bits (372), Expect = 5e-40
 Identities = 121/422 (28%), Positives = 203/422 (48%), Gaps = 20/422 (4%)

Query: 4   DKSQQKSSFLPMAIVAALFFILGFATWLNGSLMPYLKQILQLNPFQASLILFSFYIAVTF 63
           D  +++ + L  A V  LFF  GFAT L   L+  +K++  LN  +A L  F+++IA   
Sbjct: 5   DAGKRQGAGLAFAYVTTLFFAWGFATSLIDPLIAAVKRVFDLNNAEAFLTTFAWFIAYGL 64

Query: 64  TALPSAWVIRKVGYKNGMALGMGVMMIAGLLFIPAAKT-QVFALFLFAQLVMGAGQTLLQ 122
            +LP+A V+ K+GY   + +G  ++M+AG L +PAA     +   L A  V+ +G TLLQ
Sbjct: 65  MSLPAASVLSKLGYSRSI-IGALIVMVAGCLIVPAATAADWYPGVLIALFVIASGVTLLQ 123

Query: 123 TAVNPYVVRLGPEESAAARVSVMGILNKGAGVIAPLVFSALILDSFKDRIGTTLTQVQID 182
            A NP V  LG  + A++R+++    N     + P + S ++L       G  +T     
Sbjct: 124 VAANPLVAELGSPKGASSRLNLSQAFNSLGTTVGPWLGSHVLLTGGVFAAGAVVTAATRT 183

Query: 183 EMANGLVLPYLGMAVFIGILALAVKKSPLPELSNEDEVADHTDKSQIKAALSHPNLALGV 242
           +    + + +LGM  F  ++A+ +  +   +  N      H   S +K ALS P    G 
Sbjct: 184 QSLRSIDMAFLGMGAFFALIAVFIFTA--RKKINAAAPESHNAVSPLK-ALSSPWAVFGA 240

Query: 243 LALFVYVAVEVIAGDTIGTFALSLGIDHYGVMTSYTMVCMVLGYILGILLIPRVISQPTA 302
           LA+F+YV  EV  G  +  F  S  I +  + T+  MV +  G      ++ R I   +A
Sbjct: 241 LAIFLYVGSEVAIGGMLTNFLESPDILNAPIETAGKMVALYWGG----AMVGRFIG--SA 294

Query: 303 LMISAILGLLLTLGILFGDNNSYAIANLLLVPFGGVALPDTLLLIAFLGLANAIVWPAVW 362
           ++     G++L    +     + A+  L +   GG   P     +  +GL N+I++P ++
Sbjct: 295 VLTKVRPGIVLACCTV-----AAAVLCLTVSQIGG---PTAAYAVLSIGLFNSIMFPTIF 346

Query: 363 PLALSGMGKLTSTGSALLIMGIAGGAFGPVSWGLMSSATDMGQQGGYMVMLPCYLFILFY 422
            LAL      TS  S LL+ GI GGA  P     ++ A     Q  ++V +  Y+ +  +
Sbjct: 347 TLALERSTAPTSATSGLLVFGIIGGALLPQIAAHIADAAGK-LQPAFIVPMLGYVGLTIF 405

Query: 423 AV 424
           A+
Sbjct: 406 AI 407