Pairwise Alignments

Query, 280 a.a., hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 231 a.a., TorF family putative porin from Brevundimonas sp. GW460-12-10-14-LB2

 Score = 88.6 bits (218), Expect = 1e-22
 Identities = 74/238 (31%), Positives = 112/238 (47%), Gaps = 30/238 (12%)

Query: 51  AQLAGLALTTSLFSSIAAAEVSGNISLTNDYRFRGVSQTAGDFAVQGGIDWSFESGFSVG 110
           A L GLA   S  S++   +V+ N+   +DY FRG SQT+ + A+QGG+D +    F  G
Sbjct: 16  AGLIGLAAPASAQSTV---DVAWNVGAVSDYVFRGFSQTSENPAIQGGVDLT-SGSFYAG 71

Query: 111 AWASNLDYDTPDYNGPDIEYDFYAAYGGEVHDNLSYDITLYRYNYSGE---SDLGYFEMT 167
           AWASN+D+     +  D E D Y  Y  E     + D     Y Y GE   +D  Y E  
Sbjct: 72  AWASNVDFG----DDTDAEVDLYGGYRTEA-GGFALDFGAIGYLYVGEPDGADYNYAEFK 126

Query: 168 A----GVEFSGFRVAYWYTNDFGGSDLDYHYGELNYSYEFIEHWSLNLHYGYSIGDALDD 223
           A     V  + F  A +Y+ DF G+D +  Y E+N ++     W+++   G    D  DD
Sbjct: 127 AAASRAVGPATFGAAVYYSPDFFGADKEATYAEVNAAFSPAPKWTVSGALGKQWLDVSDD 186

Query: 224 GEDFDSYSDYSVVVSTELLGLGLSLA-WLGTDLSSEKKVSDGVFQNDDTVLASVSYAF 280
                 Y+ ++V       G+G +L   +G D+       DGV   +D ++ +V   F
Sbjct: 187 ------YTTWNV-------GVGYALTDKVGVDVRYHDTDVDGVPGAEDRIVGAVKLTF 231