Pairwise Alignments

Query, 382 a.a., drug resistance transporter, Bcr/CflA family protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 402 a.a., major facilitator transporter from Pseudomonas simiae WCS417

 Score =  141 bits (356), Expect = 3e-38
 Identities = 106/364 (29%), Positives = 174/364 (47%), Gaps = 17/364 (4%)

Query: 23  IYSPALPDIAEHFAVPISAAAQTLSVYFVAFAIGVFCWGRLADVIGRRKAMLAGLVCYAI 82
           IY PALP +        +    +L+V+FV   +    +G ++DV GR+  + AGLV +A+
Sbjct: 25  IYLPALPTLGASLHASPALVQMSLTVFFVIVGVCQLFYGPISDVFGRKPPIYAGLVIFAV 84

Query: 83  GSAFALLVSDFSLLLMARVLSAFGAAVGSVITQTMMRDSYSGEELAKVFSVMGMSFGISP 142
            S    L      L+  R L AFGA  G VI + ++RD Y+G E AK+ +++ +   +SP
Sbjct: 85  ASVGCALAPTIETLIAFRALQAFGACAGMVIPRAIVRDLYTGHEAAKLMALLMLVMSVSP 144

Query: 143 VIGLLLGSVLSAFWGYQGVFVVLMSSAIVLLFLSVKSLPETKPAHTQTIAIGELAIKMLS 202
           ++  L GS++ A W ++ VF VL   A+  L +++  LPET PA  +   +G+      S
Sbjct: 145 ILAPLAGSLVIALWSWREVFAVLAVVAVACLVMTIVQLPETHPAERR---LGKTLGNAFS 201

Query: 203 DRG------IIKNTLLVAAFNL-MWFSYFSLAPFMF-EAQGLSTLIFGMSGLLLGFGAFL 254
             G      +     +V  F L  +F +   APF++ E  GL+   F +   L     F 
Sbjct: 202 SYGALLRDPVFIGLSVVCGFGLATFFVFIGSAPFVYIEYYGLTPTQFSLGFALNAASFFA 261

Query: 255 GSYFNQVLLGRCCTSPRLIRLASSIALVGGVGIWLLQSTFIGLNNVYFLAPMLLIVIAY- 313
            S     L  R   +P LIR   S+  V  V + LL +T + ++++  +  +L I   + 
Sbjct: 262 MSQLTARLTARFGLAP-LIRW--SVVAVAAV-MALLAATTLWVDSLALMMTLLFIGFGFL 317

Query: 314 GIAIPNILSSALAGYRTYAGSAGALFGLFYYILLGAGLGVVGLI-NHLGGVITLAALFCT 372
           G+ +P     +L  +   AGSA AL G    I     + VVG+  +H    + +    C 
Sbjct: 318 GLLLPAAGVLSLEDHGAVAGSASALLGAIQMITAALSMTVVGVFADHTPAPMLIGIALCA 377

Query: 373 VLSM 376
           + +M
Sbjct: 378 IAAM 381