Pairwise Alignments

Query, 382 a.a., drug resistance transporter, Bcr/CflA family protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 412 a.a., Multidrug resistance transporter, Bcr/CflA family from Pseudomonas putida KT2440

 Score =  122 bits (306), Expect = 2e-32
 Identities = 100/353 (28%), Positives = 164/353 (46%), Gaps = 24/353 (6%)

Query: 9   LAVLLMMFPQIMETIYSPALPDIAEHFAVPISAAAQTLSVYFVAFAIGVFCWGRLADVIG 68
           L   L     +   I  PA P++A    V       TLS +F+ FA      G LAD  G
Sbjct: 29  LLAALAAISNLSTNIILPAFPEMARQLNVSSQELGLTLSSFFITFAFAQLLVGPLADRYG 88

Query: 69  RRKAMLAGLVCYAIGSAFALLVSDFSLLLMARVLSAFGAAVGSVITQTMMRDSYSGEELA 128
           R++ ++ GL+ + +G+ +A   +   +L++ RV+ A G    +V+ + + RD Y GE LA
Sbjct: 89  RKRLVVGGLMIFVVGTFWAANAATLDMLILGRVIQAIGVCAAAVLARAIARDLYEGENLA 148

Query: 129 KVFSVMGMSFGISPVIGLLLGSVLSAFWGYQGVFVVLMSSAIVLLFLSVKSLPETKPAHT 188
           +  S+  ++   +P    L+GS+L+   G++ +F+ +  SAI++    ++ + ET PAH 
Sbjct: 149 RALSLTMIAAATAPGFSPLIGSMLNTTLGWRALFIAVGMSAILIALFYLRGIGETLPAHR 208

Query: 189 QT--------IAIGELAIKMLSDRGIIKNTLLVAAFNLMWFSYFSLAP-FMFEAQGLSTL 239
           +         IA G+LA   L     +  +LL++      F+ F+ AP  + E  GLS+L
Sbjct: 209 RVTQSVPAILIAYGKLASNRLFILPALATSLLMSGL----FASFAAAPSILMEGMGLSSL 264

Query: 240 IFGMSGLLLGFGAFLGSYFNQVLLGRCCTSPRLIRLASSIALVGGVGIWLLQSTFIGLNN 299
             G+      F  F        L  R     R I L S +A     G  LL    +G +N
Sbjct: 265 QVGLYFAATVFVVFAAGLAAPRLAHR--WGSRAITL-SGLATACTAGALLL----VGPSN 317

Query: 300 V---YFLAPMLLIVIAYGIAIPNILSSALAGYRTYAGSAGALFGLFYYILLGA 349
               ++   M+L +   GIA P   +  +  +   AG A AL G F  + +GA
Sbjct: 318 PSLGWYSLSMVLFLWGMGIANPLGTALTMTPFGKEAGLASALLG-FLTMAIGA 369