Pairwise Alignments

Query, 307 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 309 a.a., LysR family transcriptional regulator from Magnetospirillum magneticum AMB-1

 Score =  165 bits (418), Expect = 1e-45
 Identities = 107/302 (35%), Positives = 155/302 (51%), Gaps = 13/302 (4%)

Query: 3   RLEAAKVFVTIVERGSMIGAAEVLDMSRSMVTRYLSEMEEWSGARLLHRSTRRLSLTSAG 62
           R +    FV + E GS   AA  L +S+SM++R +S +E   G RLLHR+TR LS T AG
Sbjct: 4   RFDTIIAFVRVAETGSFSEAARRLGLSKSMISRQVSALEADLGVRLLHRTTRSLSPTEAG 63

Query: 63  EQVLDYCQRLL-ELAQEVPAVSHAQSAQPRGLLRISCSQFMAHLILPTVVRPYLAQYPQA 121
              L+ CQR+L +L +    VSH Q A PRG LR+S         L   +  +L +YP+ 
Sbjct: 64  RAYLERCQRILADLDEANLLVSHLQ-AVPRGRLRVSAPLSFGIGHLSACLPGFLERYPEI 122

Query: 122 SVNFHVSSQTVDLVAERIDMAIRITNELDPSLIARRLGECESVVCAAPRYLASHSPIIQP 181
            +    + + VDLV E  D+A+RI    D SLI RRL     +  A+P YL       +P
Sbjct: 123 ELEMGFTDRHVDLVEEGWDLAVRIGRLADSSLIVRRLAPVRRMAAASPAYLERRGTPRRP 182

Query: 182 EDLTRHNCLTYSYFGDVMWRFTQINHLVTHPDGKSAGQQFNIPVKGNLSANDSMVVLNAT 241
           E+L+ H+CLT+       WRF       T  DGK       + V+G   A++  V+ +  
Sbjct: 183 EELSAHDCLTHGGRVQSEWRF-------TGDDGKPV----QVEVRGRFHADNGDVLRDMA 231

Query: 242 LAGEGIAMQPVWAVKSYLNSGELVPLLRDFKPQSLGVYGVYQSRKHMQPTLRVMMDMLVA 301
           LAG G+ + P + +   + +G LVPLL  + P    +  VY   +H+ P +R  +D L  
Sbjct: 232 LAGLGVVLLPSFFLGDDIRAGRLVPLLEAYVPLDSSLNAVYPHGRHLSPKVRAFVDHLAT 291

Query: 302 YF 303
            F
Sbjct: 292 SF 293