Pairwise Alignments

Query, 307 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 295 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  191 bits (485), Expect = 2e-53
 Identities = 114/303 (37%), Positives = 167/303 (55%), Gaps = 15/303 (4%)

Query: 1   MDRLEAAKVFVTIVERGSMIGAAEVLDMSRSMVTRYLSEMEEWSGARLLHRSTRRLSLTS 60
           M+   A  +FVT+VE GS   A + L +S+S +++ +S++E+  G +LL R+TR LSLT 
Sbjct: 1   MEHFSALPIFVTVVECGSFSLAGQKLGLSKSAISKRISQLEQHLGIQLLQRTTRSLSLTD 60

Query: 61  AGEQVLDYCQRLLELAQE-VPAVSHAQSAQPRGLLRISCSQFMAHLILPTVVRPYLAQYP 119
           AG +  +Y +  ++L QE + A+S  Q   PRG LRIS       L +  ++  +L +YP
Sbjct: 61  AGARYFEYIRPAVQLTQEGLDAISELQQT-PRGNLRISVPMVFGRLYIAPLIAEFLKRYP 119

Query: 120 QASVNFHVSSQTVDLVAERIDMAIRITNELDPSLIARRLGECESVVCAAPRYLASHSPII 179
              +   +  +  DL+A   D+AIRI    D SLIAR++  C SV+CA+P YL  H   +
Sbjct: 120 DIQLQMQMDDKITDLIAGGFDLAIRIGELPDSSLIARKIAPCLSVICASPAYLTQHGLPM 179

Query: 180 QPEDLTRHNCLTYSYFGD-VMWRFTQINHLVTHPDGKSAGQQFNIPVKGNLSANDSMVVL 238
            P +LT+HNCL YSYF D V W F         PDG        +  KGN   N+S  + 
Sbjct: 180 TPCELTQHNCLFYSYFQDGVEWSFHS-------PDGMQ-----RVQPKGNYQVNNSDAIN 227

Query: 239 NATLAGEGIAMQPVWAVKSYLNSGELVPLLRDFKPQSLGVYGVYQSRKHMQPTLRVMMDM 298
            A L G GIA  P + V+  L +G L  LL D+     G+Y VY  RK+    + V+++ 
Sbjct: 228 QACLDGLGIANLPRFIVEPDLQTGHLQALLTDYPLPEHGIYAVYPQRKYQPTKVTVLIEF 287

Query: 299 LVA 301
           L+A
Sbjct: 288 LMA 290