Pairwise Alignments

Query, 307 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 302 a.a., LysR family transcriptional regulator from Dickeya dianthicola ME23

 Score =  294 bits (752), Expect = 2e-84
 Identities = 148/306 (48%), Positives = 209/306 (68%), Gaps = 13/306 (4%)

Query: 1   MDRLEAAKVFVTIVERGSMIGAAEVLDMSRSMVTRYLSEMEEWSGARLLHRSTRRLSLTS 60
           MDR+ AA+VFV I E+GS+ GAA+ L+MSR+MVTRYL+EME W+ ARLLHRSTR+LSLT 
Sbjct: 1   MDRITAAQVFVAITEQGSLTGAAQALEMSRAMVTRYLAEMERWAEARLLHRSTRQLSLTG 60

Query: 61  AGEQVLDYCQRLLELAQEVPAVSHAQSAQPRGLLRISCSQFMAHLILPTVVRPYLAQYPQ 120
            GE VL +C+ LL ++Q++   +  +  +P GL+R++CS  +A   L   +  YL +YP+
Sbjct: 61  EGETVLRHCRELLTVSQKLETPARGRK-EPSGLMRLTCSPSLAQTTLVAAITAYLLRYPK 119

Query: 121 ASVNFHVSSQTVDLVAERIDMAIRITNELDPSLIARRLGECESVVCAAPRYLASHSPIIQ 180
            +++  V+S T++L+ ERID+AIRIT++LD  LIARRLG C S+VCAAP YLA+H    +
Sbjct: 120 TAIDLQVASHTLNLIEERIDLAIRITSQLDSGLIARRLGGCPSIVCAAPSYLAAHGTPQR 179

Query: 181 PEDLTRHNCLTYSYFGDVMWRFTQINHLVTHPDGKSAGQQFNIPVKGNLSANDSMVVLNA 240
            EDL  HNCLTYS+FG  +WRFT              G+   IPV G+ SANDS+++L A
Sbjct: 180 VEDLAVHNCLTYSFFGKSLWRFTH------------KGETVAIPVSGSFSANDSLMLLEA 227

Query: 241 TLAGEGIAMQPVWAVKSYLNSGELVPLLRDFKPQSLGVYGVYQSRKHMQPTLRVMMDMLV 300
            L G GI++QPV++V   + +  L+ L  + +PQ L +Y VY SR+ M   LR ++D L 
Sbjct: 228 ALNGAGISLQPVYSVTDLIANKRLIALFPEAQPQELDIYAVYHSRERMPSALRALVDFLA 287

Query: 301 AYFASS 306
            +F S+
Sbjct: 288 QWFDSN 293