Pairwise Alignments

Query, 307 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 296 a.a., LysR family transcriptional regulator from Dickeya dianthicola 67-19

 Score =  257 bits (657), Expect = 2e-73
 Identities = 134/299 (44%), Positives = 188/299 (62%), Gaps = 11/299 (3%)

Query: 1   MDRLEAAKVFVTIVERGSMIGAAEVLDMSRSMVTRYLSEMEEWSGARLLHRSTRRLSLTS 60
           MDRL A +VFV + + GS+  AA  LDMSRSM TRY++ +E W G RLLHRSTR L LTS
Sbjct: 1   MDRLIAMQVFVDVADLGSLTAAANKLDMSRSMATRYIASLEHWLGVRLLHRSTRSLGLTS 60

Query: 61  AGEQVLDYCQRLLELAQEVPAVSHAQSAQPRGLLRISCSQFMAHLILPTVVRPYLAQYPQ 120
           AG  +L  C+++L L+Q++ A+S     +P G++RI+ S       L   +  Y A+YP 
Sbjct: 61  AGHDMLVRCRQILALSQDMAALSGQGGTEPHGVIRIASSVSFGQSYLAQALSRYRARYPH 120

Query: 121 ASVNFHVSSQTVDLVAERIDMAIRITNELDPSLIARRLGECESVVCAAPRYLASHSPIIQ 180
            +    ++ + + LV ERID+++ +TN  D +LIA+ LG C SVVCAAP YLA H+P I 
Sbjct: 121 TTTELILTDRAIKLVEERIDLSVDVTNTPDHNLIAKPLGHCASVVCAAPDYLARHAPPIT 180

Query: 181 PEDLTRHNCLTYSYFGDVMWRFTQINHLVTHPDGKSAGQQFNIPVKGNLSANDSMVVLNA 240
           P DL RH+CL ++  G   WRFT           + +G  + + V G + AND++V+LNA
Sbjct: 181 PNDLIRHDCLNHTRLGR-EWRFTH----------RESGASYRVMVAGRVIANDTLVLLNA 229

Query: 241 TLAGEGIAMQPVWAVKSYLNSGELVPLLRDFKPQSLGVYGVYQSRKHMQPTLRVMMDML 299
             AGEGIA  P +  +  L +GEL  LL D++ Q+LG+Y  Y SR+HM  TLR ++D L
Sbjct: 230 ARAGEGIACLPEFVARGGLETGELTLLLPDYQTQALGIYACYVSRRHMPATLRTLLDFL 288