Pairwise Alignments

Query, 417 a.a., serine hydroxymethyltransferase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 417 a.a., serine hydroxymethyltransferase from Pseudomonas sp. SVBP6

 Score =  603 bits (1556), Expect = e-177
 Identities = 302/417 (72%), Positives = 347/417 (83%), Gaps = 2/417 (0%)

Query: 1   MLKKDMNIADYDPELFNAIQNETLRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYP 60
           M  K   I  YD  L  AI  E  RQE+HIELIASENYTS RVMQAQGS LTNKYAEGYP
Sbjct: 1   MFSKQDQIQGYDDALLAAINAEEQRQEDHIELIASENYTSKRVMQAQGSGLTNKYAEGYP 60

Query: 61  GKRYYGGCEYVDVVETLAIERAKQLFGATYANVQPHSGSQANSAVYMALLKPGDTVLGMN 120
           GKRYYGGCE+VD VE LAI+RAKQLFGA YANVQPHSGS AN AVY+ALL+ GDT+LGM+
Sbjct: 61  GKRYYGGCEHVDKVEQLAIDRAKQLFGADYANVQPHSGSSANGAVYLALLQAGDTILGMS 120

Query: 121 LAHGGHLTHGSPVNFSGRLYNIIPYGIDES-GKIDYDEMERLAVEHKPKMMIGGFSAYSG 179
           LAHGGHLTHG+ V+ SG+LYN + YGID S G IDYDE+ERLAVEHKPKM++ GFSAYS 
Sbjct: 121 LAHGGHLTHGAKVSSSGKLYNAVQYGIDTSTGLIDYDEVERLAVEHKPKMIVAGFSAYSK 180

Query: 180 IVDWARMREIADKIGAYLFVDMAHVAGLIAAGVYPNPVPHAHVVTSTTHKTLAGPRGGII 239
            +D+ R R+IADK+GAYLFVDMAHVAGL+AAG+YPNP+P+A VVT+TTHKTL GPRGG+I
Sbjct: 181 TLDFPRFRQIADKVGAYLFVDMAHVAGLVAAGLYPNPLPYADVVTTTTHKTLRGPRGGLI 240

Query: 240 LSAADDEELYKKLNSAVFPGGQGGPLMHVIAGKAVAFKEALEPEFKTYQQQVVNNAKAMV 299
           L A  +EE+ KKLN+AVFPG QGGPLMHVIA KAV FKEALEP FKTYQQQV++NA+AM 
Sbjct: 241 L-ARSNEEIEKKLNAAVFPGAQGGPLMHVIAAKAVCFKEALEPGFKTYQQQVIDNAQAMA 299

Query: 300 EVFLERGYKIVSGGTSNHLMLVDLIGRDLTGKEADAALGSANITVNKNSVPNDPRSPFVT 359
           EVF++RGY +VSGGT NHL LV LI + LTGK+ADAALG A+ITVNKN+VPNDP+SPFVT
Sbjct: 300 EVFVKRGYDVVSGGTDNHLFLVSLIRQGLTGKDADAALGRAHITVNKNAVPNDPQSPFVT 359

Query: 360 SGVRIGTPAITRRGFKEAEAKQLTGWICDILDDAHNPAVIERVKGQVLALCARFPVY 416
           SG+RIGTPA+T RGFK ++  +L GWICDILD+  +  V   V   V ALCA FPVY
Sbjct: 360 SGLRIGTPAVTSRGFKVSQCVELAGWICDILDNLGDADVEADVAKNVSALCADFPVY 416