Pairwise Alignments

Query, 552 a.a., DNA repair protein RecN (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 569 a.a., DNA repair protein RecN from Ralstonia solanacearum PSI07

 Score =  385 bits (988), Expect = e-111
 Identities = 232/552 (42%), Positives = 329/552 (59%), Gaps = 6/552 (1%)

Query: 1   MLCQLSINNFAIVRFLELDFSPGMTSITGETGAGKSIAIDALGLCLGNRADASSVRPGAS 60
           ML  L+I +F IV  L+LD + G T  TGETGAGKSI IDAL L LG RADA+ VR GA 
Sbjct: 1   MLRSLTIRDFVIVHALDLDLADGFTVFTGETGAGKSILIDALALTLGERADAAVVREGAP 60

Query: 61  KTEVSARFSLHDVPLAKRWLEDNDLELDDECIL-RRTIGSDGRSRAYINGNPVPLTQLKL 119
           + +++A F  H  P    WLE ++L  DD  IL RRT+ + GRS+A+ING  V L QL+ 
Sbjct: 61  RADITAAFDTH--PQVTTWLEAHELHGDDGTILLRRTVDAAGRSKAFINGAAVTLAQLRE 118

Query: 120 LGQLLVGIHGQHAHHAMLKSEHQLTLLDSYANHRLLIDTVTASYQRCKQIEAELKQLEAS 179
           +G+ LV IHGQHAH  +LK++ Q  LLD++A     + TV   Y+  + +    +  E  
Sbjct: 119 VGEQLVDIHGQHAHQLLLKTDAQRRLLDAHAGLEDEVRTVGERYRAWQAVVRLREAAEQQ 178

Query: 180 QHERIARKQLVQYQVEELDEFDLKVGEFEEIEQEHKRLANGTELVDSCQASLYLLTDGEE 239
             E    ++ V++QV EL +   + GE+E+I+ EH RL++   L++  +A+L  L++ + 
Sbjct: 179 SREAQLERERVEWQVNELQKLAPQPGEWEDIQAEHHRLSHAASLIEGTRAALDALSESDG 238

Query: 240 SNIESLLNKVVSLAENLQSYDPALTNVSTMLNEALIQVQESAGELQHYLSKLELDPAYFA 299
           + +  L   V SL + L   DPAL +V   L  A +QVQE+   L  Y  + ELDP   A
Sbjct: 239 AVLTQLGAAVHSL-QALAEIDPALADVLAALEPAQVQVQEAVHSLARYADRAELDPDRLA 297

Query: 300 YLEERLSKAMQLARKHHVSPDKLAEHHLALKAELTTLDDDETKLEEIQLQVEASKSAYLA 359
            ++ RL     +ARK+ V+P+ L       +A+L  L    + L+ +Q Q   + +AYL 
Sbjct: 298 EVDARLQALHTMARKYRVAPETLPAELAQRQAQLAALQA-ASDLDALQAQEAQTHAAYLQ 356

Query: 360 NAQKLSQSRARYAKELDKLVTQSIHELNMPKGKFTIEVNFNPEIMSVNGSDNIEFMVTTN 419
            AQ LS+ RA+ A+EL   VT ++  L+M  G+F I ++   E     G + +EF+V  +
Sbjct: 357 AAQALSRGRAKAARELANAVTGAMQGLSMAGGRFDIALH-PLEHGGAAGLEQVEFLVAGH 415

Query: 420 PGQPLQPISRVASGGELSRIGLGIQVITAKKVATPTLIFDEVDVGISGPTAAVVGRMLRS 479
            G   +P+++VASGGEL+RI L I VI ++   TPTLIFDEVD GI G  A VVGR LR 
Sbjct: 416 AGVSPRPLAKVASGGELARISLAISVIASEASPTPTLIFDEVDSGIGGAVAEVVGRRLRE 475

Query: 480 LGESTQVLCVTHLPQVAGNGHQHMFVNKFNKAGSTETTMTPLDKEQRIQELARLLGGDTI 539
           LG   QVLCVTHLPQVA   + H+ V K    GST + +  LD   R+ E+AR+LGG ++
Sbjct: 476 LGTRRQVLCVTHLPQVAALANHHVQVAKQTVGGSTRSDLVVLDATGRVDEIARMLGGASL 535

Query: 540 TSNTLANARELL 551
           T  T  +A E+L
Sbjct: 536 TDTTRRHADEML 547