Pairwise Alignments

Query, 552 a.a., DNA repair protein RecN (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 550 a.a., DNA repair protein RecN from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  308 bits (788), Expect = 5e-88
 Identities = 191/555 (34%), Positives = 302/555 (54%), Gaps = 11/555 (1%)

Query: 1   MLCQLSINNFAIVRFLELDFSPGMTSITGETGAGKSIAIDALGLCLGNRADASSVRPGAS 60
           ML  LSI N+A++  LE+  S G+  ITGETGAGKSI + A+GL LGNRAD  ++     
Sbjct: 1   MLKNLSITNYALIETLEMGPSKGLNMITGETGAGKSIMLGAIGLLLGNRADTKALFNDEK 60

Query: 61  KTEVSARFSLHDVPLAKRWLEDNDLELDDECILRRTIGSDGRSRAYINGNPVPLTQLKLL 120
           K  +   F + +  L + + +  DL+ D +CI+RR I   G+SRA++N  PV L  LK L
Sbjct: 61  KCIIEGVFEIANYGL-EAYFQAEDLDYDPQCIIRREITPAGKSRAFVNDTPVKLDILKSL 119

Query: 121 GQLLVGIHGQHAHHAMLKSEHQLTLLDSYANHRLLIDTVTASYQRCKQIEAELKQLEASQ 180
           G+ L+ IH QH    +   E+QL+L+D++A+ +      + +Y   ++ +   ++L    
Sbjct: 120 GKALMDIHSQHDTLLLAAGEYQLSLIDAFADTKTEKTQYSTAYTAYRKAKKSYEKLVHEA 179

Query: 181 HERIARKQLVQYQVEELDEFDLKVGEFEEIEQEHKRLANGTELVDSCQASLYLLTDGEES 240
            E        Q+Q+EEL    L+ GE E +E E + L N  E+      +L L  +G+E 
Sbjct: 180 AELRKEADFNQFQLEELSALQLQEGEQETLENEQEVLDNAEEIKSKINENLQLF-NGDEL 238

Query: 241 NIESLLNKVVSLAENLQSYDPALTNVSTMLNEALIQVQESAGELQHYLSKLELDPAYFAY 300
              +LL ++    + L  Y      +    +   I+V + A  L+    K+E+D      
Sbjct: 239 GATTLLMQINQGFQQLGRYSSRFDELKERFDSVCIEVNDIAASLEDEDGKIEVDFDKLEE 298

Query: 301 LEERLSKAMQLARKHHVSPDK---LAEHHLALKA-ELTTLDDDETKLEEIQLQVEASKSA 356
           + ERLSK  QL +KH V   +     E  LA KA ++  LD++   LE+++ +++ +   
Sbjct: 299 IRERLSKIYQLQKKHGVQTVEELIALEKTLADKAFQIGNLDEE---LEQLKAEMDQTWEI 355

Query: 357 YLANAQKLSQSRARYAKELDKLVTQSIHELNMPKGKFTIEVNFNPEIMSVNGSDNIEFMV 416
                 KLSQ R R+ K   + +T  +  L M      IE++      + +G D +E + 
Sbjct: 356 LSQTGAKLSQKRQRHFKGFAEEITGLLAHLGMENAN--IEISHRTTDPTPSGKDEVEILF 413

Query: 417 TTNPGQPLQPISRVASGGELSRIGLGIQVITAKKVATPTLIFDEVDVGISGPTAAVVGRM 476
           T N G   QPI +VASGGE SR+   I+ I A KVA PTLIFDE+D GISG  A  + +M
Sbjct: 414 TANKGVKPQPIRQVASGGEFSRLMFAIKYIMADKVALPTLIFDEIDTGISGEVALQMVQM 473

Query: 477 LRSLGESTQVLCVTHLPQVAGNGHQHMFVNKFNKAGSTETTMTPLDKEQRIQELARLLGG 536
           ++ + +  QV+C++HLPQVA  G +H FV K N A  T + +  L++E+R+ E+A+++ G
Sbjct: 474 MQEIAKRHQVICISHLPQVAAKGEKHYFVYKDNSAAKTMSKIRALNQEERVTEIAKMIAG 533

Query: 537 DTITSNTLANARELL 551
              + + + +A +LL
Sbjct: 534 ANPSESAVKSAMDLL 548