Pairwise Alignments

Query, 319 a.a., Fatty acid transporter (from data) from Shewanella oneidensis MR-1

Subject, 318 a.a., Probable mdcF malonate transporter from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 92.8 bits (229), Expect = 1e-23
 Identities = 81/319 (25%), Positives = 148/319 (46%), Gaps = 31/319 (9%)

Query: 4   LTPLFAVFGIMLLGTLVQKLRFLPVETDQVLNQYVYYIAFPAVLLIALAQQPIEEILQWR 63
           LTP+F + G   LG L  +L+++     + L+  V+ +  PA+L   ++    +E L  R
Sbjct: 12  LTPVFILIG---LGYLAGRLQWIRDAAVKDLSNLVFLLLIPALLFRTMSSVHFQE-LDLR 67

Query: 64  FIAGYSAAMLVIYLMCIGISLLVNPKQHAIAAVRALNATFGNTAFIGIPLLVIIFPEQQS 123
            I  Y  A L +    + +S+         + V AL  TF N   +GI L+ + + +   
Sbjct: 68  PIGAYFLAALSL----LAVSIAWRGFNRG-SVVLALAGTFSNMVMLGITLVELAYGKSAQ 122

Query: 124 ALVAAIASLLSVLMFAVALVSLELTTNKH------RQHHAVVIMCLAITK---NPIVIGC 174
             V  + S+ ++++     + LEL   +       R  H +     A      +PI +  
Sbjct: 123 VTVLTLVSVHALILLTTGSIVLELAVAREARAGGQRAPHVLATAWSAFKGALIHPIPLPI 182

Query: 175 FIGISISALGITLPSGVALMIQQIGNTSSPCALFAVGMVLAKAMRYQKDSKLFSLTNFVE 234
             G+  +  G+TLP+ V   +Q +G+   P AL  VG+ LA+              +  +
Sbjct: 183 LCGLLFAQTGLTLPTVVDRPLQLLGSAFGPIALVLVGVTLARTPM---------AGHLRQ 233

Query: 235 LCLINLFKLILQPALVFFMLKSIGVTGDYLVMGVILSALPTAASVYLLAQRYNT--QAST 292
              +++ K ++ P LV     ++G+TG  L + V+ +ALP  A+V+L AQRY    + +T
Sbjct: 234 ALWVSVSKNLVLPLLVGLSAWALGITGMPLTVMVVAAALPVGANVFLFAQRYEVAQEVTT 293

Query: 293 CAQGILFGTIVTFFSLPIL 311
            A G+   T++  F+L ++
Sbjct: 294 AAMGL--STVLALFTLSLV 310