Pairwise Alignments

Query, 299 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 298 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

 Score =  130 bits (326), Expect = 5e-35
 Identities = 91/287 (31%), Positives = 150/287 (52%), Gaps = 9/287 (3%)

Query: 12  IYLFVHLVNAGSFSQAAKDLDMPIATVSRKLAKLEEKLDKQLFMRSTRKLRLTEEGLALF 71
           + +FV +++ GS S AA+ +    + VSR L++LE KL   L  R+TR++ LTEEG    
Sbjct: 8   LQVFVAVIDCGSISAAAEQMGQTPSAVSRTLSRLEGKLGTTLVNRTTRRMDLTEEGRYFL 67

Query: 72  QRYQSVIAQFDELS---GIGSDKPEGTLRIAAPISIISIIFIHALNEFGRLYPDIRLHIS 128
           +R + ++ Q DE+     +    P G LRI A    +    +  + EF R YP I L ++
Sbjct: 68  ERARLILQQMDEMEERLSMNRQTPTGRLRINAAAPFMLHAILPWIGEFRRQYPGIELELN 127

Query: 129 QSNELVDLIDKGIDVAIVGGAQPDSSWVSSTLGELDYRLFATPEYLAHAPELTHPDDLEN 188
             + ++DL+++  DVAI  G   DSS  + +LG    ++ A+P YL         +DL N
Sbjct: 128 TDDLIIDLLEQSTDVAIRIGELADSSLHARSLGCSPVQVLASPAYLEQHGTPRQVEDLAN 187

Query: 189 HQLI---KVWPLFNWHLKHPNGESFYFNGPTKLTLTDLHGAIQATLDHGGILYGPELFVK 245
           H L+   +   L +W L+H  G+ +    PT L  +      Q  L   GI+        
Sbjct: 188 HCLLGFSQPESLNHWPLRHAQGDRWSIR-PT-LVASSGETLRQLALAGEGIVSLSHFMTH 245

Query: 246 QQIKEGRLKVLLPEW-IGEQRRISILYHQRSQQPLKVRVFIEFMQSK 291
           + I+ GRL+VLL E   G ++ I  +Y++ +Q  L+++ F++F+Q K
Sbjct: 246 EDIRTGRLQVLLSEANNGYRQPIHAVYYRNTQLALRIQCFLDFIQRK 292