Pairwise Alignments

Query, 299 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 298 a.a., LysR family transcriptional regulator from Dickeya dadantii 3937

 Score =  131 bits (329), Expect = 2e-35
 Identities = 85/292 (29%), Positives = 145/292 (49%), Gaps = 16/292 (5%)

Query: 8   ELQLIYLFVHLVNAGSFSQAAKDLDMPIATVSRKLAKLEEKLDKQLFMRSTRKLRLTEEG 67
           +LQ + LF  +   GSF++AA+   +  +++S ++++LE+ L  +LF R+TRKL LT  G
Sbjct: 4   QLQDMALFALVAECGSFTEAARQAGIAKSSLSLRISQLEQSLGLRLFNRTTRKLNLTFAG 63

Query: 68  LALFQRYQSVIAQFDELSGIGS-------DKPEGTLRIAAPISIISIIFIHALNEFGRLY 120
               +RY     +  + S           D P G LRI +P  + + +      EF   +
Sbjct: 64  ----ERYLVHCREMRQASERAEMAMQHLRDNPSGRLRITSPAGLGATLLARLTAEFQLRF 119

Query: 121 PDIRLHISQSNELVDLIDKGIDVAIVGGAQPDSSWVSSTLGELDYRLFATPEYLAHAPEL 180
           P + L +  ++ ++DL+D+G D A+  G   DSS +  +LG++ + L A+  YLA +  +
Sbjct: 120 PAVSLDVVVADRVIDLVDEGFDAALRTGKPQDSSLIGRSLGQVPHYLVASAGYLAGSEPI 179

Query: 181 THPDDLENHQLI--KVWPLFNWHLKHPNGESFYFNGPTKLTLTDLHGAIQATLDHGGILY 238
            HP +L++H+ I  + WP + +   H   E F +  P      +L  A    L  GGI  
Sbjct: 180 AHPRELQSHRCIAHRAWPEWGF---HHEAEYFLWRLPQSHITDNLLYARACALAGGGITL 236

Query: 239 GPELFVKQQIKEGRLKVLLPEWIGEQRRISILYHQRSQQPLKVRVFIEFMQS 290
            P    ++Q+  G L  LLP W  +   + ++Y  R      +  FI+F  S
Sbjct: 237 LPAFLCREQLDSGELVCLLPGWQADSNDLYLIYPGRKLNSPALNCFIDFALS 288