Pairwise Alignments

Query, 365 a.a., A/G-specific adenine glycosylase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 350 a.a., adenine DNA glycosylase from Escherichia coli BL21

 Score =  432 bits (1110), Expect = e-126
 Identities = 203/348 (58%), Positives = 259/348 (74%), Gaps = 7/348 (2%)

Query: 5   ASFATRIVNWYDNHGRKTLPWQQDKTPYRVWVSEIMLQQTQVATVIPYYQRFMQRFPNVL 64
           + F+ ++++WYD +GRKTLPWQ DKTPY+VW+SE+MLQQTQVATVIPY++RFM RFP V 
Sbjct: 4   SQFSAQVLDWYDKYGRKTLPWQIDKTPYKVWLSEVMLQQTQVATVIPYFERFMARFPTVT 63

Query: 65  ALANAPDDEVLHHWTGLGYYARARNLHKAAKMIRDEYQGQFPTDFEQVLALPGIGRSTAG 124
            LANAP DEVLH WTGLGYYARARNLHKAA+ +   + G+FP  FE+V ALPG+GRSTAG
Sbjct: 64  DLANAPLDEVLHLWTGLGYYARARNLHKAAQQVATLHGGKFPETFEEVAALPGVGRSTAG 123

Query: 125 AVLSLSLGQHHPILDGNVKRVLARHGAIEGWPGQKPVEERLWQLTEQLTPQQDIQKYNQA 184
           A+LSLSLG+H PILDGNVKRVLAR  A+ GWPG+K VE +LW L+EQ+TP   ++++NQA
Sbjct: 124 AILSLSLGKHFPILDGNVKRVLARCYAVSGWPGKKEVENKLWSLSEQVTPAVGVERFNQA 183

Query: 185 MMDIGASICTRSKPNCAACPVAVDCKAQLMGRQTDFPGKKPKKTIPEKSAWMLVLFKDNQ 244
           MMD+GA ICTRSKP C+ CP+   C A        +PGKKPK+T+PE++ + L+L  +++
Sbjct: 184 MMDLGAMICTRSKPKCSLCPLQNGCIAAANNSWALYPGKKPKQTLPERTGYFLLLQHEDE 243

Query: 245 VFLAKRPPAGIWGGLWCFPEFSSEAALNTELEAQGYQPTQLEPLIGFRHTFSHFHLDIQP 304
           V LA+RPP+G+WGGL+CFP+F+ E +L   L  +      L  L  FRHTFSHFHLDI P
Sbjct: 244 VLLAQRPPSGLWGGLYCFPQFADEESLRQWLAQRQIAADNLTQLTAFRHTFSHFHLDIVP 303

Query: 305 MLLDLDKWASGKPSVGAIMEQNQSLWYNINQPSKVGLAAATERVLANL 352
           M L +        S    M++  +LWYN+ QP  VGLAA  ER+L  L
Sbjct: 304 MWLPVS-------SFTGCMDEGNALWYNLAQPPSVGLAAPVERLLQQL 344