Pairwise Alignments

Query, 615 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 615 a.a., Uncharacterized protein conserved in bacteria from Kangiella aquimarina DSM 16071

 Score =  375 bits (962), Expect = e-108
 Identities = 225/620 (36%), Positives = 334/620 (53%), Gaps = 24/620 (3%)

Query: 5   TNISLIAFALTTLL--------ALPTSAVPSLNDSHNVASASVTAQSESEKANALFETIF 56
           T I+L++ +L   L           T+   +   S +    S+T +  S+K N +FE  F
Sbjct: 2   TKITLVSLSLALALYGCSNEQEQTTTANTVTAEISQSQPEQSMTQEEASKKLNEIFEQQF 61

Query: 57  MENIMASPIAQTYMGIKQDYDKWDE-IGDEADALELARTQKQLAEINQLDASKLDPQTRL 115
             ++  +PI  T +G+    DK    +  E        T + L ++ Q+D + L  Q RL
Sbjct: 62  QASLELNPIQATAIGVPGYNDKLPNFLSPEFRKKSHDFTVEWLDKVKQIDRNLLTGQDRL 121

Query: 116 SLALLTQNLNNDIKDYQWRYHTYPVNQMRGGHSMIASFLINQ--HQITDVSDAKAYISRL 173
           S  +      + +K  Q+  H  P+NQ     +  A     Q       V D + ++ R+
Sbjct: 122 SYDIYVYQSEHSLKGEQFPGHLIPINQSSNIANFFAQLGSGQSFQPFKTVEDYENWLKRV 181

Query: 174 NGVPKRLTQLQKALEVRAEKGIIAPKFVFGYVISDSQNILKGAPFDKNEDSALLADFRKK 233
           +G    + Q    +    E+ ++ PK +   VI      L     D    S         
Sbjct: 182 DGGVAIMEQAITNMNQGIEQKVVQPKALMQKVIPQ----LAAHVVDDPTQSIFYTPITNM 237

Query: 234 VKALSIPETEKAPLIAEAEKALTSQVAPAYKALISYIKTLEAKADTRD--GVWKLPDGDA 291
            K  S  E +K  L A  ++A+  ++ PAYK L  YIK  +     RD  G+ + P+G+A
Sbjct: 238 PKDFS--EEDKKRLEAAYKQAIVEKLVPAYKNLHDYIKD-DYMQHARDSFGLSEQPNGEA 294

Query: 292 FYNNALARTTTTDMTADEIHQLGLAEVERIHNEMRAIMKKVHFNGTLQAFFAFMRNNPQF 351
           +YN  L   TTTD+TA+EIHQ GL EV RI  EM  +M +V F GTL+ +F +++ NP+F
Sbjct: 295 WYNYQLKTYTTTDLTAEEIHQFGLDEVARIRAEMEQVMAQVGFEGTLEDWFKYVQTNPEF 354

Query: 352 YYPNTPEGKAAYLADATQLIDNMHSRLDEVFKVKPKAAMIVKQVESFREKSAGKAFYEQP 411
           YY N  +    Y      L D ++  L  +F + PK    V+ VE+FR +SA  A Y   
Sbjct: 355 YYDNEEDLLQGY----RDLQDKVNKLLPSMFDIAPKTDYEVRAVEAFRAESAAGASYMAG 410

Query: 412 APDGSRPGSYYANLYDMKAMPKYQMEALAYHEGIPGHHMQIAISQELKDIPKFRKFGGYT 471
           +PDGSRPG +Y N +++K  PK+ ME L+ HE  PGHH QI++ QE++ +P FR+FGG +
Sbjct: 411 SPDGSRPGIFYVNTFNLKGQPKFGMETLSIHEAAPGHHFQISLQQEIEGLPMFRRFGGLS 470

Query: 472 AYIEGWGLYSESFPKEMGLYADPYSDFGRLAMELWRACRLVVDTGIHAKKWTREQGIAYY 531
            + EGW LY+ES  KEMG++ DP   +GRL+ E+ RA RLVVDTG+HAK W+R+  I Y 
Sbjct: 471 VFSEGWALYAESIGKEMGMFTDPMQYYGRLSDEMLRAMRLVVDTGLHAKGWSRQDAIDYM 530

Query: 532 VDNTPNAKSDAVKMVERHIVMPSQATAYKVGMIKLLELRHKAEKQLGDKFDIRDFHTLIL 591
           + N+  A +D V  VER+I  P QA +YKVG   +  LR +AE++LGDKFDI+ FH  +L
Sbjct: 531 MANSSMADTDVVSEVERYIAWPGQAVSYKVGQRVISNLRAEAERKLGDKFDIKAFHREVL 590

Query: 592 ANGALPLDVLEEHVNQWIAS 611
            +GA+P+ VLE  + +WI S
Sbjct: 591 VDGAVPMPVLETKIREWIDS 610