Pairwise Alignments

Query, 615 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 637 a.a., Uncharacterized protein conserved in bacteria from Kangiella aquimarina DSM 16071

 Score =  351 bits (900), Expect = e-101
 Identities = 207/595 (34%), Positives = 320/595 (53%), Gaps = 20/595 (3%)

Query: 33  NVASASVTAQSESEKA-NALFETIFMENIMASPIAQTYMGIKQDYDKW---DEIGDEADA 88
           N A +   A  +SE +   LF+ I      A P+  T  G+ Q+       D++ D + A
Sbjct: 42  NTAVSKEQAHKQSEASPEMLFDKITTTLFAARPMDATMYGVSQEVAGGYYQDKLPDYSPA 101

Query: 89  LELARTQKQLAEINQLDASKLDP---QTRLSLALLTQNLNNDIKDYQ------WRYHT-Y 138
            E A  Q      +QL   K D    +    + +   +  +  K +       W  H+ +
Sbjct: 102 AEKALRQSLRHYADQLADLKSDTIQGEENRKVVIDLAHYYSGEKQFDIGFIDGWMGHSPF 161

Query: 139 PVNQMRGGHSMIASFLINQHQITDVSDAKAYISRLNGVPKRLTQLQKALEVRAEKGIIAP 198
            V+Q+ G    + + L N H I +  +AK YI+R+      +  ++  +   AEKG I P
Sbjct: 162 IVSQINGPAIDVPNLLQNNHPIKNEQNAKDYIARMEQFGDMIESVKSKVLADAEKGWIPP 221

Query: 199 KFVFGYVISDSQNILKGAPFDKNEDSALLADFRKKVKALSIPETEKAPLIAEAEKALTSQ 258
           K +    I+ + N L G    + E  AL+ + + K+  L IP  +K  ++ +A     + 
Sbjct: 222 KVI----INGALNFLNGFVAAEPEKHALVTNLQNKLDKLDIPAEQKEKMMFDAVSITKTT 277

Query: 259 VAPAYKALISYIKTLEAKADTRDGVWKLPDGDAFYNNALARTTTTDMTADEIHQLGLAEV 318
           + PAYK L   ++ L  KA    G+W  P+G  FY  A++    T++T +E+HQ+GL EV
Sbjct: 278 IYPAYKNLAMVMEGLLEKASEESGIWAQPNGSEFYRYAVSELGDTELTPEEVHQIGLDEV 337

Query: 319 ERIHNEMRAIMKKVHFN-GTLQAFFAFMRNNPQFYYPNTPEGKAAYLADATQLIDNMHSR 377
           ERI  EM AI+    ++ GT+    A + +  +F Y ++ EG+   L D   ++ +++  
Sbjct: 338 ERISAEMDAILISEGYDQGTVGERMAALNDEDRFIYEDSDEGRQKLLDDLNGMLADINEL 397

Query: 378 LDEVFKVKPKAAMIVKQVESFREKSAGKAFYEQPAPDGSRPGSYYANLYDMKAMPKYQME 437
           +   F   P   + ++++   R+  A    Y  P  DGS PG Y+ NL DMKA PK+ ++
Sbjct: 398 MPTRFATIPPYDVEIRRIPVERQDGAPGGQYTPPPLDGSEPGIYWINLKDMKANPKFDLK 457

Query: 438 ALAYHEGIPGHHMQIAISQELKDIPKFRKFGGYTAYIEGWGLYSESFPKEMGLYAD-PYS 496
            L YHE  PGHH QIA++   + +P  R+   Y AY+EGW LYSE    EMG+Y D PY 
Sbjct: 458 TLTYHEANPGHHWQIALNMAQESLPLIRRIAPYNAYVEGWALYSELVAWEMGMYKDDPYG 517

Query: 497 DFGRLAMELWRACRLVVDTGIHAKKWTREQGIAYYVDNTPNAKSDAVKMVERHIVMPSQA 556
           D GRL  EL+RA RLVVDTG+H KKWTREQ I Y  + T  A+S  V  +ER++V P QA
Sbjct: 518 DLGRLKAELFRAVRLVVDTGLHHKKWTREQAIQYMAEKTGTAQSSVVSEIERYMVWPGQA 577

Query: 557 TAYKVGMIKLLELRHKAEKQLGDKFDIRDFHTLILANGALPLDVLEEHVNQWIAS 611
             YK+GM+ ++E R +A+++LG+ FDI++FH L+L  GA+P+ VL + ++ WI S
Sbjct: 578 LGYKLGMLNIVEQRERAKEELGEAFDIKEFHDLVLLGGAVPMSVLNDKIDAWIES 632