Pairwise Alignments

Query, 615 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 602 a.a., DUF885 family protein from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  305 bits (782), Expect = 3e-87
 Identities = 198/603 (32%), Positives = 303/603 (50%), Gaps = 26/603 (4%)

Query: 18  LALPTSAVPSLNDSHNVASASVTAQSESEKANALFETIFMENIMASPIAQTYMGIKQDYD 77
           L L  +A  ++  +   A    TA     + N+L +  F  +I  +P   T +G+     
Sbjct: 7   LLLTAAATAAVAPAAAQAQTQTTAADADGRLNSLLDGWFEADIDENPEGATNLGLDHGTR 66

Query: 78  -----KWDEIGDEADALELARTQKQLAEINQLDASKLDPQTRLSLALLTQNLNNDIKDYQ 132
                K  E G  A   +  +   + A+++  D S L P   L+ A+         +  +
Sbjct: 67  AGLSAKLSEAGPAAIRNDRQKAVSRWAQLDAFDQSGLSPAGALNYAIAAFGAETAAQTAR 126

Query: 133 WRYHTYP-------VNQMRGGHSMIASFLINQHQITDVSDAKAYISRLNGVPKRLTQLQK 185
           + Y   P       V Q+ G +     FL NQH+I D + A A++SRL      L     
Sbjct: 127 FDYGAGPGRPSPYIVTQLSGAYFSTPDFLDNQHRIEDAAGADAFLSRLEAFSGVLEGETA 186

Query: 186 ALEVRAEKGIIAPKFVFGYVISDSQNILKGAPFDKNEDSALLADFRKKVKALSIPETEKA 245
            ++  A  G+I P F+   ++   +  L   P     D A+L    +K   L +   +  
Sbjct: 187 KIQEDAGLGVIPPDFIIDRMLPQIRT-LHDTPA---ADLAMLKSLARKTAGLGLTGYD-- 240

Query: 246 PLIAEAEKALTSQVAPAYKALISYIKTLEAKADTRDGVWKLPDGDAFYNNALARTTTTDM 305
              A A   +  +V PA  A I  ++ L  +A    GVW+LPDG+AFY   L   TTT +
Sbjct: 241 ---ARAAAIVDQKVKPALAAQIEALEALRPRATHEAGVWRLPDGEAFYAAGLKANTTTTL 297

Query: 306 TADEIHQLGLAEVERIHNEMRAIMKKVHFN-GTLQAFFAFMRNNPQFYYPNTPEGKAAYL 364
           TA EIH LG  +V  I  E+ AI+K   +  GT+      +  +P   + NT  GKA  L
Sbjct: 298 TAKEIHALGREQVAEISAEIDAILKAQGYTQGTVGERIQALNKDPAQLFANTDAGKAELL 357

Query: 365 ADATQLIDNMHSRLDEVFKVKPKAAMIVKQVESFREKSAGKAFYEQPAPDGSRPGSYYAN 424
           A    L+ ++  +L +VF   PK+ + +++V    +  A   +Y+ P  DGSRPG+YY N
Sbjct: 358 AWLNMLVSDLEPKLPQVFGRLPKSHVEIRRVPVSIQSGAPGGYYQGPPLDGSRPGAYYIN 417

Query: 425 LYDMKAMPKYQMEALAYHEGIPGHHMQIAISQELKDIPKFRKFGGYTAYIEGWGLYSESF 484
           L D    P++ +  L YHE  PGHH+Q+A+ +E  ++P++R+ GG++AY EGW LY+E+ 
Sbjct: 418 LRDTGNWPRFALPTLTYHEASPGHHLQVALQRESDELPQWRRAGGFSAYNEGWALYAEAV 477

Query: 485 -PKEMGLYAD-PYSDFGRLAMELWRACRLVVDTGIHAKKWTREQGIAYYVDNTPNAKSDA 542
              ++G+YAD P    G L   L+RA RLVVDTG+H+++W+REQ + Y   +       +
Sbjct: 478 AADDLGVYADNPLGRVGFLMSYLFRAVRLVVDTGLHSERWSREQAVDYMATSGAKPLDAS 537

Query: 543 VKMVERHIVMPSQATAYKVGMIKLLELRHKAEKQLGDKFDIRDFHTLILANGALPLDVLE 602
              + R+ V P QA AYKVG   +  LR +AE + G  FD+R FH  +L NG+LPL VLE
Sbjct: 538 NSEINRYCVWPGQACAYKVGHTVIARLRKEAEGRPG--FDLRAFHDKVLENGSLPLAVLE 595

Query: 603 EHV 605
             V
Sbjct: 596 RVV 598