Pairwise Alignments

Query, 615 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 610 a.a., DUF885 family protein from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  315 bits (807), Expect = 4e-90
 Identities = 187/528 (35%), Positives = 280/528 (53%), Gaps = 16/528 (3%)

Query: 92  ARTQKQLAEINQLDASKLDPQTRLSLALLTQNLNNDIKDYQWRY------HTYPVNQMRG 145
           A T++Q AE++++D SKLD +       LTQNL+  I  Y   Y      + Y V+Q  G
Sbjct: 89  AFTRRQRAELSRIDRSKLDARNANYYDSLTQNLDGVIATYDIPYGQGGWPNPYRVSQQGG 148

Query: 146 GHSMIASFLINQHQITDVSDAKAYISRLNGVPKRLTQLQKALEVRAEKGIIAPKFVFGYV 205
            +     FL NQH I   +DA AY++R+N     L      L+     G+I P F+    
Sbjct: 149 AYQSTPDFLANQHTIETAADADAYVARVNAFADVLMAETDRLKEDYALGVIPPDFILAKA 208

Query: 206 ISDSQNILKGAPFDKNEDSALLADFRKKVKALSIPETEKAPLIAEAEKALTSQVAPAYKA 265
           I     +L   P   +  +  + D R + K L+          A+ E+ +T +V PA  A
Sbjct: 209 IRQQDGVL-ATPAATSPLTQSVVD-RGRAKGLT------GDWGAQVERLVTERVYPALAA 260

Query: 266 LISYIKTLEAKADTRDGVWKLPDGDAFYNNALARTTTTDMTADEIHQLGLAEVERIHNEM 325
             + +K  +  A     V +LP G+ +Y N+L   TTT +TADEIH+ G+ ++  +    
Sbjct: 261 QNAVLKAAQPNAVHEASVRRLPQGEQYYANSLRYITTTRLTADEIHRTGVEQMADLTARA 320

Query: 326 RAIMKKVHFN-GTLQAFFAFMRNNPQFYYPNTPEGKAAYLADATQLIDNMHSRLDEVFKV 384
             ++K      G++      + ++P++ Y NT  GKA  +A     + +M +RL   F  
Sbjct: 321 DVLLKAQGLTQGSVAERIKALGDDPKYVYANTDAGKAELIAKLNAQMADMQARLPNAFGR 380

Query: 385 KPKAAMIVKQVESFREKSAGKAFYEQPAPDGSRPGSYYANLYDMKAMPKYQMEALAYHEG 444
            PKA + +K+V    E  A   +Y  P+ DG+RPG Y+ NL D    P + +  L YHE 
Sbjct: 381 LPKAKVEIKRVPPEIEAGAPMGYYNSPSLDGTRPGIYWINLKDTAEWPSWTLPTLTYHEA 440

Query: 445 IPGHHMQIAISQELKDIPKFRKFGGYTAYIEGWGLYSESFPKEMGLY-ADPYSDFGRLAM 503
            PGHH+QI++ QE +  P      G+++Y+EGWGLY+E    E+G Y +DP    G L  
Sbjct: 441 TPGHHLQISLQQESESAPLLMNLLGFSSYVEGWGLYAEQLADELGAYESDPVGQIGYLQS 500

Query: 504 ELWRACRLVVDTGIHAKKWTREQGIAYYVDNTPNAKSDAVKMVERHIVMPSQATAYKVGM 563
            ++RA RLVVDTGIH+K W+RE+GI Y ++   + +  A   VER+   P QA AYKVG 
Sbjct: 501 LMFRAARLVVDTGIHSKGWSREEGIRYMMEAYGDQEGAATSEVERYCGWPGQACAYKVGH 560

Query: 564 IKLLELRHKAEKQLGDKFDIRDFHTLILANGALPLDVLEEHVNQWIAS 611
            + + LR KA+  LG +FDI+ FH   LA G +PL VLE  V+ W+A+
Sbjct: 561 NEWVRLREKAKTTLGPRFDIKGFHDTALAAGGVPLSVLERIVDGWVAT 608