Pairwise Alignments

Query, 615 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 595 a.a., DUF885 domain-containing protein from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  283 bits (725), Expect = 1e-80
 Identities = 185/610 (30%), Positives = 298/610 (48%), Gaps = 28/610 (4%)

Query: 7   ISLIAFALTTLLALPTSAVPSLNDSHNVASASVTAQSESEKANALFETIFMENIMASPIA 66
           IS +A A       P +AV     +   A A+  A +      A +ET +++++   PI+
Sbjct: 3   ISYLAVAAMLAAGSPVAAVAQTPPA---AVATAPADAALNAVIADYET-YLKSV--DPIS 56

Query: 67  QTYMGIKQDYDKWDEIGDEADALELARTQKQLAEINQLDASKLDPQTRLSLALLTQNLNN 126
               G  +   +  ++  E +  + A  Q  +  +  +D + L     ++ A L   LN 
Sbjct: 57  AGGEGDVEAMGRVPDLSREFELAQRAPLQGFVRRLAAIDPASLSHGGGINHAFLLYTLNR 116

Query: 127 DIKDYQWRYHTYPVNQMRGGHSMIASFLINQHQITDVSDAKAYISRLNGVPKRLTQLQKA 186
            ++   +       +   GG    A ++    ++  V++A+AYI R+ G  +   Q    
Sbjct: 117 SLEGLDYDTSRLAFDS-EGGPGTWALYVGGSTRLNSVAEAEAYIKRIRGFGQIYAQTTAN 175

Query: 187 LEVRAEKGIIAPKFVFGYVISDSQNILKGAPFDKNEDSALLADFRKKVKALS-----IPE 241
                + G++  + V    ++ ++N           D A+  D    +K L+     + +
Sbjct: 176 ARRGLDTGLVQARSVTESALTLARN-----------DVAIKPDAEPLLKPLATLPSTVSQ 224

Query: 242 TEKAPLIAEAEKALTSQVAPAYKALISYIKT-LEAKADTRDGVWKLPDGDAFYNNALART 300
            +K  L AEA  A++  + PA +A + ++++    KA  + G+   P G   Y   +   
Sbjct: 225 ADKDRLSAEATAAVSEAILPARRAWLEFLESDYLPKAPVQPGIGNRPGGKELYAYLVRGH 284

Query: 301 TTTDMTADEIHQLGLAEVERIHNEMRAIMKKVHFNGTLQAFFAFMRNNPQFYYPNTPEGK 360
           TTTD+T D+IHQ+GL EV RI   M   MK   + G    F  F+R +PQFY  +    +
Sbjct: 285 TTTDLTPDQIHQIGLDEVARIRARMDVEMKASGWTGDFAGFLNFLRTDPQFYATS----R 340

Query: 361 AAYLADATQLIDNMHSRLDEVFKVKPKAAMIVKQVESFREKSAGKAFYEQPAPDGSRPGS 420
            A L  A+++       L  +F   P+    V+ V    E++     Y   +        
Sbjct: 341 EALLQQASEMAKRADGGLPPLFATLPRLTYDVQPVPPQIEENYTTGRYNGGSMQNGVSAH 400

Query: 421 YYANLYDMKAMPKYQMEALAYHEGIPGHHMQIAISQELKDIPKFRKFGGYTAYIEGWGLY 480
           Y  N   +   P Y++ AL  HE +PGHH+QI + QE    P FR+    +AY EGWGLY
Sbjct: 401 YIVNTSKLDQRPLYELPALTLHEAVPGHHLQIGLQQEAPGQPYFRRQANVSAYTEGWGLY 460

Query: 481 SESFPKEMGLYADPYSDFGRLAMELWRACRLVVDTGIHAKKWTREQGIAYYVDNTPNAKS 540
           +E   +EMG Y  PY  FGRL+ E+WRACRLV DTG+H   WT EQ  A + DN+  A  
Sbjct: 461 AEYLGEEMGFYRTPYERFGRLSYEMWRACRLVADTGLHWMGWTEEQARACFRDNSALAPH 520

Query: 541 DAVKMVERHIVMPSQATAYKVGMIKLLELRHKAEKQLGDKFDIRDFHTLILANGALPLDV 600
           +    ++R+I  P QATAYK+G I+L E+R +AE++LG KF++R FH  +L  G LPL +
Sbjct: 521 NIETELQRYIGWPGQATAYKIGEIRLREIRARAERELGSKFNVRTFHDALLVEGPLPLAL 580

Query: 601 LEEHVNQWIA 610
           L++ ++ WIA
Sbjct: 581 LDQRMDAWIA 590