Pairwise Alignments

Query, 213 a.a., putative transporter, required for L-alanine utilization (from data) from Shewanella oneidensis MR-1

Subject, 207 a.a., Putative inner membrane protein from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  138 bits (348), Expect = 6e-38
 Identities = 75/201 (37%), Positives = 120/201 (59%), Gaps = 6/201 (2%)

Query: 12  LIGILAEAMTGALAAGRKQMDLFGVVIIGCATAIGGGTLRDMLLGNYPLVWVENVHYLIA 71
           ++G    A++G L AG+ +MD FGV+++G  TA+GGGT+RDM L N P+ WV++   L+ 
Sbjct: 8   IVGTAVFAISGVLLAGKLRMDPFGVLVLGVVTAVGGGTIRDMALDNGPVFWVKDPTDLVV 67

Query: 72  IAFASLLTVAIAPVMRYLSKLFL-AIDALGLAVFSIVGAQKTLMLGFSPTIAVVMGLVTG 130
               S+LT+ +    R L K  L  +DA+GLAVF  +G  K  +    P +AV MG++TG
Sbjct: 68  AMVTSMLTILLVRQPRRLPKWMLPVLDAVGLAVFVGIGVNKAFLAETGPLVAVCMGVITG 127

Query: 131 VFGGVIRDILCNQVPLIFKKELYAVISLFTAGLYIT---LNAYQLEEWINLVICLTLGFS 187
           V GG+IRD+L  ++P+I + E+YA   +    ++ T     +  LE    + + +TL   
Sbjct: 128 VGGGIIRDVLAREIPMILRTEIYATACIIGGIVHATAFYTFSVPLESASMMGMVVTL--F 185

Query: 188 LRMLALRYHWSMPTFDYQSSG 208
           +R+ A+R+H  +PTF    +G
Sbjct: 186 IRLAAIRWHLKLPTFALDENG 206



 Score = 42.4 bits (98), Expect = 6e-09
 Identities = 32/107 (29%), Positives = 54/107 (50%), Gaps = 10/107 (9%)

Query: 96  IDALGLAVFSIVGAQKTLMLGFSPTIAVVMGLVTGVFGGVIRDILCNQVPLIFKKE-LYA 154
           +D +G AVF+I G      L   P   +V+G+VT V GG IRD+  +  P+ + K+    
Sbjct: 6   LDIVGTAVFAISGVLLAGKLRMDPFGVLVLGVVTAVGGGTIRDMALDNGPVFWVKDPTDL 65

Query: 155 VISLFTAGLYITL--NAYQLEEW-------INLVICLTLGFSLRMLA 192
           V+++ T+ L I L     +L +W       + L + + +G +   LA
Sbjct: 66  VVAMVTSMLTILLVRQPRRLPKWMLPVLDAVGLAVFVGIGVNKAFLA 112