Pairwise Alignments

Query, 213 a.a., putative transporter, required for L-alanine utilization (from data) from Shewanella oneidensis MR-1

Subject, 207 a.a., UPF0126 family inner membrane protein from Escherichia coli BL21

 Score =  136 bits (342), Expect = 3e-37
 Identities = 75/203 (36%), Positives = 119/203 (58%), Gaps = 10/203 (4%)

Query: 12  LIGILAEAMTGALAAGRKQMDLFGVVIIGCATAIGGGTLRDMLLGNYPLVWVENVHYLIA 71
           ++G    A++G L AG+ +MD FGV+++G  TA+GGGT+RDM L + P+ WV++   L+ 
Sbjct: 8   IVGTAVFAISGVLLAGKLRMDPFGVLVLGVVTAVGGGTIRDMALDHGPVFWVKDPTDLVV 67

Query: 72  IAFASLLTVAIAPVMRYLSKLFL-AIDALGLAVFSIVGAQKTLMLGFSPTIAVVMGLVTG 130
               S+LT+ +    R L K  L  +DA+GLAVF  +G  K       P IAV MG++TG
Sbjct: 68  AMVTSMLTIVLVRQPRRLPKWMLPVLDAVGLAVFVGIGVNKAFNAEAGPLIAVCMGVITG 127

Query: 131 VFGGVIRDILCNQVPLIFKKELYA----VISLFTAGLYITLNA-YQLEEWINLVICLTLG 185
           V GG+IRD+L  ++P+I + E+YA    +  +  A  Y T +   +    + +V+ L   
Sbjct: 128 VGGGIIRDVLAREIPMILRTEIYATACIIGGIVHATAYYTFSVPLETASMMGMVVTLL-- 185

Query: 186 FSLRMLALRYHWSMPTFDYQSSG 208
             +R+ A+R+H  +PTF    +G
Sbjct: 186 --IRLAAIRWHLKLPTFALDENG 206



 Score = 42.4 bits (98), Expect = 6e-09
 Identities = 28/84 (33%), Positives = 46/84 (54%), Gaps = 3/84 (3%)

Query: 96  IDALGLAVFSIVGAQKTLMLGFSPTIAVVMGLVTGVFGGVIRDILCNQVPLIFKKE-LYA 154
           +D +G AVF+I G      L   P   +V+G+VT V GG IRD+  +  P+ + K+    
Sbjct: 6   LDIVGTAVFAISGVLLAGKLRMDPFGVLVLGVVTAVGGGTIRDMALDHGPVFWVKDPTDL 65

Query: 155 VISLFTAGLYITL--NAYQLEEWI 176
           V+++ T+ L I L     +L +W+
Sbjct: 66  VVAMVTSMLTIVLVRQPRRLPKWM 89