Pairwise Alignments

Query, 274 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 263 a.a., DgsA anti-repressor MtfA from Dickeya dianthicola 67-19

 Score =  107 bits (268), Expect = 2e-28
 Identities = 73/243 (30%), Positives = 119/243 (48%), Gaps = 11/243 (4%)

Query: 35  SPFPKA---WRAILKRRLPFFHALPADLQLQLKRHIQVFLAEKHFVGCDGLQITDEIRVT 91
           SP P A   W+  L   +P    L    + ++    + FL  K  V   GL +T+ +   
Sbjct: 8   SPTPDAFSDWQPALS--IPLLTPLAEPERQRIVMLGRQFLRLKRLVPLQGLALTELMAQR 65

Query: 92  IAAQACLLLLNRKTDFYPKLRQILVYPDAFIVDSQRQDPAGLISEQRNVLAGESWEHGQV 151
           IA    L +L    ++      +L++P+ F+VD +  D  GL+    +V +G+SW+ G +
Sbjct: 66  IALLFALPVLELGIEWLDGFHDVLIHPEPFMVDGEWMDEFGLVHSGPSVQSGQSWDQGPI 125

Query: 152 ILSWKNTLEGAANPHDGNNVVIHEFAHQLDQE-DGYANGAPILQRRQDYRSWSSVFNQAF 210
           +L+W    +  +    G N++IHE AH+LD   +   +G P +  R D   W  V + A 
Sbjct: 126 VLNWLEIQD--SFDLSGFNLIIHEVAHKLDMRGNERPSGVPAMPLR-DIARWEQVLHAAM 182

Query: 211 NELVHDAAM--GKPSLFDYYGATNPAEFFAVVTEVFFEKPAALNLEHPALYRELSHFYQV 268
            EL  +  +     +  D Y AT+PAE FAV++E FF  P  L    PA+Y+    FY+ 
Sbjct: 183 EELREEIELVGEDAASMDPYAATDPAECFAVLSEYFFSAPDLLAERFPAVYQHFCGFYRQ 242

Query: 269 DPI 271
           +P+
Sbjct: 243 NPL 245