Pairwise Alignments

Query, 260 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 336 a.a., Nitrogenase iron protein from Azospirillum sp. SherDot2

 Score = 51.2 bits (121), Expect = 3e-11
 Identities = 58/251 (23%), Positives = 98/251 (39%), Gaps = 52/251 (20%)

Query: 5   IGGEKGGSGKSCLAQNIAVFLTTECGASVIMVDCDPQR---------------------- 42
           +  +KGG GK+  A N+A  LT E GA V+++DCD Q                       
Sbjct: 74  VANQKGGVGKTATAVNLAYALT-EGGARVLLIDCDSQSNATVHVGIGNAAIVALEQQRKT 132

Query: 43  -----------------TTSDWIQARNNNPKLASINCVQLYGK------IRNDLLSLEQH 79
                            TT   +        LA  + V+L         +R  L  +   
Sbjct: 133 LYYVLRSEEPLTSVIMPTTESGLDLAPAGLSLADAD-VELAADSTGGLILREKLDEVRHS 191

Query: 80  YDFVIVDCGGQDNLALRATMSVASHILMPLRPKRRDLKTVSHMDDIVATC-KMINPKLHA 138
           YDFV++DC     L     +S A  +++P++ +   L  V  + D +    + +NP L  
Sbjct: 192 YDFVVMDCAPNLGLVTANALSAAELVVVPVQTEALALLGVKRLVDTIGRIRRRVNPALRI 251

Query: 139 SFVITQCPNLPNQANRILEAKEICKTY--DINVLDSITYSRNIYDDSEESGLSVLEIEPK 196
           + +I    N     +R    +E+ ++Y   + V D I  +  +Y  +  +G+  L  +PK
Sbjct: 252 AGIIPTMYNDRLTQDR-ATLQELHESYAGQVPVFDPIPRA-TVYGKAAAAGMITLAGDPK 309

Query: 197 GKAAAEIRAIA 207
              A   R +A
Sbjct: 310 APGAETFREVA 320