Pairwise Alignments

Query, 374 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 292 a.a., FIG021952: putative membrane protein from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 67.8 bits (164), Expect = 4e-16
 Identities = 83/354 (23%), Positives = 130/354 (36%), Gaps = 84/354 (23%)

Query: 29  VLKSAREQMGLSIAQTAVKLHLRPGIVENLEADDFSNIASSTYVRGYVKNYARMLGVDNA 88
           +L++ARE  GL IA  A  L +    +E LEA  +S +   T+ R    +  R L +D A
Sbjct: 11  LLRAAREAAGLHIAALAAALKVPVKKLEALEAGRYSELPDLTFARALASSACRHLKIDPA 70

Query: 89  LIEACLARQVPFVTQPPM--QSFSRKTTYQ-----ARDTKLKWLS----FFIVIVLLGLF 137
            I     +Q+P    P +     +  T +Q     A    L WLS       +++LLG  
Sbjct: 71  PI----LQQIPQSVIPELGGSRHAINTPFQPAHDPAPINPLSWLSRPALLAAIVLLLGAL 126

Query: 138 VVWWMQRATLVTHVDISKPTAEEVAAANQTLPGDVLLTETDASARLSEIAVNGSMATDGP 197
           V+ +M             P AEE A                           G++ T   
Sbjct: 127 VIVFM-------------PRAEEPAPVEA-----------------------GNVVTPLE 150

Query: 198 VKDTDVSSIDPNTNVMTAMEGEQTANSSNESSRNSVAKPNQTVTASGAVQTPSTTATVTV 257
                V++ +P       +  ++ A +         A P     A  A   P +TA V  
Sbjct: 151 TPAEPVAATEP-------VPAQEPAPAP--------ALPGADGAAPVAPAAPVSTAPVVP 195

Query: 258 PVQNTASAQTQVTANASATNVTSPTTNAQTMPAVAGQSTLNIQLTGDCWINIVDANGKAI 317
           P  +T                  P   A   P  A  S L I  TG+ W+ +V+ +G  +
Sbjct: 196 PAASTP-----------------PEAAASAAPTPAAGSLLTIAATGESWVEVVNGSGSVV 238

Query: 318 VDGVRGAGANIQASGVLPFKVILGAPTVVSSFTVDGKAISLAEFPKGRVARLTI 371
           +  +  AG  +  S   P+ V+LG     +  TV GK   +  + +  VAR  +
Sbjct: 239 IQRMLQAGDAVDFSSAPPYTVVLGR-AEAAQVTVRGKPFDVTRYARNNVARFEV 291