Pairwise Alignments

Query, 371 a.a., 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 370 a.a., flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase from Magnetospirillum magneticum AMB-1

 Score =  376 bits (966), Expect = e-109
 Identities = 190/354 (53%), Positives = 252/354 (71%)

Query: 7   IKRRPSTRIYVGNVPIGDGAPIAVQSMTNTKTTDVEATVAQIRALEKVGADIVRVSVPTM 66
           I RR S +I+VG+V +G  API+VQ+MTNT TTD++ T+ QIR     GAD+VRVS P  
Sbjct: 9   IVRRKSRQIHVGSVAVGGDAPISVQTMTNTLTTDIKGTLEQIRRAADAGADLVRVSCPDE 68

Query: 67  DAAEAFKLIKQSVSVPLVADIHFDYRIALKVAEYGVDCLRINPGNIGNEERIRSVVECAR 126
           D+ +AFK I +   VPL+ADIHF Y+  ++ AE G  CLRINPGNIG+ ER+R VV+ A+
Sbjct: 69  DSTKAFKTIAKESPVPLIADIHFHYKRGIEAAEAGAACLRINPGNIGSHERVREVVKAAK 128

Query: 127 DKNIPIRIGVNGGSLEKDLMDKYKEPTPEALLESAMRHVDILDRLNFDQFKVSVKASDVF 186
           D    +RIGVN GSL+K L+DKY EP P+AL+ESA+ H  +L+  +F +FK++VKASDVF
Sbjct: 129 DYGCSMRIGVNAGSLDKHLLDKYGEPCPDALVESALEHAKLLEDNDFFEFKIAVKASDVF 188

Query: 187 LAVESYRLLAKQIRQPLHLGITEAGGARAGAVKSAVGLGMLLAEGIGDTLRISLAADPVE 246
           LAV +Y+ LAK    PLHLGITEAGG   G VKSA+G+G LL +GIGDTLR+SL+AD  E
Sbjct: 189 LAVAAYQGLAKACDYPLHLGITEAGGLIGGTVKSAIGIGSLLWQGIGDTLRVSLSADVTE 248

Query: 247 EIKVGFDILKSLRIRSRGINFIACPSCSRQEFDVISTVNELERRLEDVTTAMDVSIIGCV 306
           E+KVGF++LK+L +R RG+  ++CPSC+RQ FDVI TV  LE RL  V   + +SI+GCV
Sbjct: 249 EVKVGFEMLKTLDLRHRGVRIVSCPSCARQGFDVIKTVETLENRLSHVRAPVTLSILGCV 308

Query: 307 VNGPGEALVSHIGLTGGHRKSGYYDEGERQKERFDNDNLVDSLEAKIRAKASQM 360
           VNGPGEA  + +G+TGG   S     G       D   +VD +   + A+A+++
Sbjct: 309 VNGPGEARETMVGITGGGADSHKVYIGGSPDHNVDGKTMVDHIVELVEARAAEI 362