Pairwise Alignments

Query, 371 a.a., 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 379 a.a., 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC 1.17.4.3) from Kangiella aquimarina DSM 16071

 Score =  512 bits (1319), Expect = e-150
 Identities = 260/359 (72%), Positives = 303/359 (84%), Gaps = 1/359 (0%)

Query: 7   IKRRPSTRIYVGNVPIGDGAPIAVQSMTNTKTTDVEATVAQIRALEKVGADIVRVSVPTM 66
           IKRR S +I VGNVP+G  APIAVQSMTNT T DV+ATVAQIRAL   GADIVRVSVPTM
Sbjct: 7   IKRRKSRQIMVGNVPVGGDAPIAVQSMTNTDTCDVDATVAQIRALADTGADIVRVSVPTM 66

Query: 67  DAAEAFKLIKQSVSVPLVADIHFDYRIALKVAEYGVDCLRINPGNIGNEERIRSVVECAR 126
            AAEAFKLIKQ   VPLVADIHFDYRIALKVAEYGVDCLRINPGNIG+EER+++VV+ A+
Sbjct: 67  KAAEAFKLIKQQSPVPLVADIHFDYRIALKVAEYGVDCLRINPGNIGSEERVKAVVDAAK 126

Query: 127 DKNIPIRIGVNGGSLEKDLMDKYKEPTPEALLESAMRHVDILDRLNFDQFKVSVKASDVF 186
            +NIPIRIGVN GSLEKDL +KY EPTPEAL+ESA RH+DIL+R NF  +K+S+KASDVF
Sbjct: 127 ARNIPIRIGVNAGSLEKDLQEKYGEPTPEALVESAYRHIDILERHNFKDYKISLKASDVF 186

Query: 187 LAVESYRLLAKQIRQPLHLGITEAGGARAGAVKSAVGLGMLLAEGIGDTLRISLAADPVE 246
           + V +YR+LAK+I  PLHLGITEAG  R+GAVKSAVGLGMLLAEGIGDT+R+SLAADPVE
Sbjct: 187 MTVSAYRILAKEIDNPLHLGITEAGSFRSGAVKSAVGLGMLLAEGIGDTIRVSLAADPVE 246

Query: 247 EIKVGFDILKSLRIRSRGINFIACPSCSRQEFDVISTVNELERRLEDVTTAMDVSIIGCV 306
           E+KVG+DILKSL +R RGIN IACPSCSRQ+FDVI TVNELE+RLEDV   +DV++IGCV
Sbjct: 247 EVKVGYDILKSLGLRQRGINLIACPSCSRQQFDVIKTVNELEQRLEDVNEHIDVAVIGCV 306

Query: 307 VNGPGEALVSHIGLTGGHRKSGYYDEGERQKERFDNDNLVDSLEAKIRAKASQMANRIQ 365
           VNGPGEA    IGLTGG +KS  Y+ GE+   + +N+ LVD LEA+IR K ++   + +
Sbjct: 307 VNGPGEAKEVTIGLTGGFKKSMLYENGEK-SHKVENEALVDELEAQIRRKLAEKREKTE 364