Pairwise Alignments

Query, 395 a.a., PQQ enzyme repeat domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 380 a.a., Outer membrane beta-barrel assembly protein BamB from Variovorax sp. SCN45

 Score =  134 bits (336), Expect = 6e-36
 Identities = 100/382 (26%), Positives = 171/382 (44%), Gaps = 25/382 (6%)

Query: 9   LAAGLSL---AMLSACSSSDVEEEPVSELTAIQATVFPEVSWSASVGDGVGDYYSRLTPA 65
           L AG +L   A L+ACS +   +    EL A  A +    +W   V +        LT A
Sbjct: 13  LRAGSALVLVAFLAACSGTSKPKP--EELPANPALMGVRQAWKVQVPE----VKFPLTAA 66

Query: 66  VRYGKIFAADRYGAVMAFDEASGEQVWRKDFSEEFRDNALAKNKGARLAAGITAARNKLF 125
           +    +  A   G V+A D  +G + WR              + G  LAAG+ +  +   
Sbjct: 67  INGDIVTVAGSDGTVVAIDARAGRETWRA-------------SAGTPLAAGVGSDGSLAA 113

Query: 126 IGGESGLLAALNAEDGQVLWHVIAGGELLSKPTVADDVVVVSTSSGSLEAYNVDTGAKLW 185
           +      L AL  E+G+VLW      +  + P VA   V V T+  S+ A++  +G +LW
Sbjct: 114 VVTTGNELVAL--ENGKVLWKQKLSAQAFTAPLVAGRRVFVQTADRSVSAWDGQSGRRLW 171

Query: 186 VYDMQLPNLTLRGTGSAAYEAGGFFIGTADGKVAVVVKNNGQAAWEQAIYNPTGGNEFTR 245
           +      NL LR +G      G   +    G++  +   NG + WE  I  P G N+  R
Sbjct: 172 IQQRAGENLVLRKSG-VLIAVGDTLVAGLGGRLVGINPGNGTSRWEAPIAAPRGTNDVER 230

Query: 246 MADVDMTPLILGDNLYAVSYNGNLVSMELRTGRIIWTRKYSSFNELTTAGLSLFLVDDHS 305
           + D+  +   +GD++ A +Y  ++  ++   G + W++  S  + ++     ++  +   
Sbjct: 231 LVDLTGSVSRVGDSVCARAYYASVGCVDTARGTLAWSKPASGADGVSGDDRFVYGTESDG 290

Query: 306 RIYSVDRRNGLELWSNSELVNRTLTSPEVYKDYLVVGDFEGYLHFIDRSTGSIVGRIQVD 365
            + +  R +G   W  S L NR LTSP      L++G+  G LHF+ R  G+++ R+  D
Sbjct: 291 SVIAWRRGDGERAWQMSRLKNRELTSPLAVGRSLIIGESTGTLHFVSREDGALLNRVTPD 350

Query: 366 SSGLFSQPIVVDDKIYVQGRSG 387
            S +   P++V + + V    G
Sbjct: 351 GSAITVAPVLVGNTVVVVTAKG 372