Pairwise Alignments

Query, 395 a.a., PQQ enzyme repeat domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 393 a.a., outer membrane protein assembly factor BamB from Pectobacterium carotovorum WPP14

 Score =  320 bits (819), Expect = 6e-92
 Identities = 155/390 (39%), Positives = 244/390 (62%), Gaps = 4/390 (1%)

Query: 6   KNLLAAGLSLAMLSACSSSDVEEEPV--SELTAIQATVFPEVSWSASVGDGVGDYYSRLT 63
           K LL   +S+A+LS CS  + EE+ V  S L  ++    P   W++SVG G+G++YS L 
Sbjct: 5   KTLLVGLVSVALLSGCSLFNSEEDVVTMSPLPQVENQFTPTKVWNSSVGSGIGEFYSNLH 64

Query: 64  PAVRYGKIFAADRYGAVMAFDEASGEQVWRKDFSEEFRDNALAKNKGARLAAGITAARNK 123
           PA +  ++FAADR G V A D + G+++WR D SE  + N  ++N  A L+ G+T + N 
Sbjct: 65  PAWQDNRVFAADRRGTVKAMDLSDGKEIWRADLSE--KTNFFSRNNPALLSGGVTVSGNH 122

Query: 124 LFIGGESGLLAALNAEDGQVLWHVIAGGELLSKPTVADDVVVVSTSSGSLEAYNVDTGAK 183
           +++G E   + ALNAEDG  +W     GE LS+P V+D VV++ TS+G L+A N   GA 
Sbjct: 123 VYVGSERAQVYALNAEDGTPVWQTKVAGEALSRPVVSDGVVLIHTSNGMLQALNEADGAI 182

Query: 184 LWVYDMQLPNLTLRGTGSAAYEAGGFFIGTADGKVAVVVKNNGQAAWEQAIYNPTGGNEF 243
            W  ++ +P L+LRG  +     G   +G  +G+V  V+ N GQ  W+Q I  P+G  E 
Sbjct: 183 KWSVNLDMPTLSLRGESAPTTAFGAAIVGGDNGRVNAVMINQGQLIWQQRISQPSGATEI 242

Query: 244 TRMADVDMTPLILGDNLYAVSYNGNLVSMELRTGRIIWTRKYSSFNELTTAGLSLFLVDD 303
            R+ DVD TP++ G+ +YA+ YNGN+ +++LR+G+++W R+  S ++    G  ++LVD 
Sbjct: 243 DRLNDVDTTPVVAGEVVYALGYNGNMTALDLRSGQVLWKRELGSVHDFIIDGDRIYLVDQ 302

Query: 304 HSRIYSVDRRNGLELWSNSELVNRTLTSPEVYKDYLVVGDFEGYLHFIDRSTGSIVGRIQ 363
             R+ +++   G+ LW  S+L++R LT+P +Y  YLVVGD EGYLH+++ + G  V + +
Sbjct: 303 DDRVVALNTNGGVSLWRQSDLLHRNLTAPALYNGYLVVGDTEGYLHWLNTADGRFVAQQK 362

Query: 364 VDSSGLFSQPIVVDDKIYVQGRSGKLAVVT 393
           VDSSG  S+P+V  DK+ +Q ++G +   T
Sbjct: 363 VDSSGFLSKPVVASDKLLIQAKNGDVYAFT 392