Pairwise Alignments

Query, 395 a.a., PQQ enzyme repeat domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 443 a.a., pyrrolo-quinoline quinone from Magnetospirillum magneticum AMB-1

 Score = 97.8 bits (242), Expect = 5e-25
 Identities = 78/346 (22%), Positives = 142/346 (41%), Gaps = 20/346 (5%)

Query: 47  WSASVGDGVGDYYSRL-TPAVRYGKIFAADRYGAVMAFDEASGEQVWRKDFSEEFRDNAL 105
           W +  G G G     L  P +  GKIF  D    V AFD  +G+++WR + + +  D + 
Sbjct: 95  WKSDAGTGAGKRRRLLGQPIIAEGKIFTVDASSMVTAFDANTGKRLWRTELTPD--DTSE 152

Query: 106 AKNKGARLAAGITAARNKLFIGGESGLLAALNAEDGQVLWHVIAGGELLSKPTVADDVVV 165
               G     G+     ++F       + AL+A  G++ W     G L   PTV    V 
Sbjct: 153 VYTSG-----GLGYEDGQVFAATGFAQVVALDARTGKIDWRQTVSGPLRGSPTVRGGRVF 207

Query: 166 VSTSSGSLEAYNVDTGAKLWVYDMQLPNLTLRGTGSAAYEAGGFFIGTADGKVAVVVKNN 225
             T      A   + G+ LW +     +  L    S A +     +  + G++  +   N
Sbjct: 208 AVTVDNQTHALAAEDGSVLWTHAGIAESAGLLAGNSPAVDGNMVVVPYSSGELFALRVEN 267

Query: 226 GQAAWEQAIYNPTGGNEFTRMADVDMTPLILGDNLYAVSYNGNLVSMELRTGRIIWTRKY 285
           G   W+ ++           + D+   P I    +YA+S    LV +E R+GR IW ++ 
Sbjct: 268 GSMIWQDSLSTVRRTENVGALMDIRGRPAIDRGRVYAISNADMLVCLEERSGRRIWEKEI 327

Query: 286 SSFNELTTAGLSLFLVDDHSRIYSVDRRNGLELWSNSELVN----------RTLTSPEVY 335
                   AG  L+++ + + + +++ + G  +W  +E+ N               P + 
Sbjct: 328 GGVQSPWIAGDYLYVLTNSNEVLALEAKTGRIVWV-TEMQNWENPKDREGRIVWVGPVLA 386

Query: 336 KDYLVVGDFEGYLHFIDRSTGSIVGRIQVDSSGLFSQPIVVDDKIY 381
            D L+V   +G L  +   TG ++G  +  ++ +   PI+ +  +Y
Sbjct: 387 SDRLIVASSDGKLVSLSPYTGDMLGWEEAPAA-ISIAPIIANGTMY 431