Pairwise Alignments

Query, 395 a.a., PQQ enzyme repeat domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 388 a.a., Beta-barrel assembly machine subunit BamB from Kangiella aquimarina DSM 16071

 Score =  246 bits (627), Expect = 1e-69
 Identities = 137/395 (34%), Positives = 206/395 (52%), Gaps = 15/395 (3%)

Query: 1   MKSWCKNLLAAGLSLAMLSACSSSDVEEEPVSELTAIQATVFPEVSWSASVGDGVGDYYS 60
           +  W + ++   ++ + L ACS   V   P  EL  I+     E +W   +GDG    ++
Sbjct: 2   ISGWTQRIVTLLIATSFLVACSDEVVN--PPKELDDIEEKFSIESAWVEVIGDGDDGKFN 59

Query: 61  RLTPAVRYGKIFAADRYGAVMAFDEASGEQVWRKDFSEEFRDNALAKNKGARLAAGITAA 120
            L PA+   K+  AD  G + AFD  +G+ +W     E              L+ G+TA 
Sbjct: 60  SLIPAIWEDKVITADVKGLISAFDLKTGDLIWETQLKEP-------------LSGGVTAN 106

Query: 121 RNKLFIGGESGLLAALNAEDGQVLWHVIAGGELLSKPTVADDVVVVSTSSGSLEAYNVDT 180
              + +G +   +  L+  DG+ LWHV    E+L+KP + D  +VV T  G + AY++ T
Sbjct: 107 AGLVAVGTKDAKVHVLDINDGKKLWHVDVTTEVLAKPAIDDGRLVVRTPDGRIFAYSLAT 166

Query: 181 GAKLWVYDMQLPNLTLRGTGSAAYEAGGFFIGTADGKVAVVVKNNGQAAWEQAIYNPTGG 240
             + W YD  +PNLTLRGT +    +G    G A+GK+A      G   WEQ I  P G 
Sbjct: 167 QKQEWFYDRIIPNLTLRGTSAPVATSGIVISGFANGKMAAFNIRTGDLLWEQRISAPRGS 226

Query: 241 NEFTRMADVDMTPLILGDNLYAVSYNGNLVSMELRTGRIIWTRKYSSFNELTTAGLSLFL 300
           +E +R+ DVD +P+I  + LYA  +NG  ++M+L  GR +W  + S   EL      ++L
Sbjct: 227 SEISRIVDVDSSPVIYSNYLYAAGFNGYAIAMDLTNGRYLWREETSVTQELLVDATRVYL 286

Query: 301 VDDHSRIYSVDRRNGLELWSNSELVNRTLTSPEVYKDYLVVGDFEGYLHFIDRSTGSIVG 360
           V+   +I ++DR  G ++WS   L+ R  T     +DY+VVGDFEGYLH++D+STG  V 
Sbjct: 287 VETTGKIVALDRFTGEQVWSQEGLLYRKPTGAADNEDYIVVGDFEGYLHWLDKSTGEFVA 346

Query: 361 RIQVDSSGLFSQPIVVDDKIYVQGRSGKLAVVTLP 395
           R  +D  G+   PIV D+ I    R G L V+  P
Sbjct: 347 RTHLDRYGVAHAPIVTDEHIIATTRYGYLHVMENP 381