Pairwise Alignments

Query, 1287 a.a., serine protease, subtilase family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 1036 a.a., serine protease from Pseudomonas simiae WCS417

 Score = 56.2 bits (134), Expect = 1e-11
 Identities = 55/186 (29%), Positives = 85/186 (45%), Gaps = 35/186 (18%)

Query: 487 PVMADLRGKVVICDRGEISLADKVTNMFFAAGVII-RNTPTSNQNMASARYALPSLLINE 545
           P++  + G      +G I  A       FAAG    RN P +   +A   Y +P +  N 
Sbjct: 252 PILGTIAGGAY---QGAIDAARSGVLTIFAAGNDYNRNNPDAISGLA---YFVPEIAPN- 304

Query: 546 LDGKQLLEWMKRTDTPKVSISAANAEYDQANAD--ILADFSSRGPYKWQTELMVPHIAAP 603
                   W+        S++A     D A+AD  +++ FSSR  Y          ++AP
Sbjct: 305 --------WL--------SVAALQQNPDTASADPYVISTFSSRCGYAASF-----CVSAP 343

Query: 604 GVDIYAAYADEMPFTSVNDAAPSDFAFLSGTSMASPHVAGSAALLRQLHPDWTPAEIQSA 663
           G  IY++  +        D   +D+A  +GTSMA+PHVAGSAA+L +  P  +  +I + 
Sbjct: 344 GTKIYSSVINGTNL----DNLTTDYANFNGTSMAAPHVAGSAAVLMERFPYMSGDQISTL 399

Query: 664 MMLTAT 669
           +  TAT
Sbjct: 400 LKTTAT 405