Pairwise Alignments

Query, 1287 a.a., serine protease, subtilase family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 807 a.a., cold-active serine alkaline protease (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 47.4 bits (111), Expect = 5e-09
 Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 1/77 (1%)

Query: 619 SVNDAAPSDFAFLSGTSMASPHVAGSAALLRQLHPDWTPAEIQSAMMLTA-TTNVLKEDG 677
           +V++    D+ + +GTSMA+PHV+G A L+   HP  + A+I++A+  TA        D 
Sbjct: 491 TVSNQGNKDYEYYNGTSMATPHVSGVATLVWSYHPQCSAAQIRNALKQTAEDLGTAGRDD 550

Query: 678 KTPAGIFDIGSGRLQID 694
           KT  G+ +  + +  +D
Sbjct: 551 KTGYGLVNAMAAKAFLD 567



 Score = 37.4 bits (85), Expect = 5e-06
 Identities = 81/372 (21%), Positives = 132/372 (35%), Gaps = 109/372 (29%)

Query: 52  RYIIQLMQAPAATHAAQLFNKAPQDRTSVSKASITQKLPQKISHLLQTSQLEQYRQEIAH 111
           RYI++   A AA             + S      + +LP  +++  Q +++       A 
Sbjct: 47  RYIVKFKNADAAV------------QISAENVQASDQLPTTMNYQPQVAEIS------AQ 88

Query: 112 HQGIFKTTAS--KTLGRPLQAKMQFDTAFNGMVLELTPDEAKTMLTVPQVLKVIKETPTE 169
           H  + K  A   K +GR            N   ++L     K +     V  V ++ P  
Sbjct: 89  HSVLNKANAREMKRIGRS-----------NSYSVKLDNTSLKALKARTDVEYVEEDAPRR 137

Query: 170 LQTDNGP---QLIGASNLWDGNATGLAAKGDGIIIGILDTGINTDNRAFSAVGDDGHNII 226
             T+  P     +GA+ L D  A                      NR    + D G++  
Sbjct: 138 FLTETTPWGQTYVGATQLSDSQA---------------------GNRTICII-DSGYDRA 175

Query: 227 NPLGSGNYLGDCVKDATLCNDKLIGVYSFPLVTDEYNGLRPANGEDYNGHGSHTASTAAG 286
           +P  SGN       + T  N+   G           N   P N    N HG+H A T A 
Sbjct: 176 HPDLSGN-------NVTGTNNSGTG-----------NWFEPGNN---NAHGTHVAGTIA- 213

Query: 287 NALVNVPVLMPNIGEEVGDGIETGTVLSNISGVAP--HANIISYQVCDQSGC-YPSLTIA 343
            A+ N             DG         + GV P  + NI   +V +++G  Y S  ++
Sbjct: 214 -AIAN------------NDG---------VIGVMPNQNTNIHVIKVFNEAGWGYSSSLVS 251

Query: 344 SVELAIKAGVDVLNYSIGPRGGVQNDPWNTASDIAFLSAREAGIFVAMAAGNAGPDAETV 403
           +V+  +  G +V+  S+G  G       +T    A  +    G+ +  AAGN G +  + 
Sbjct: 252 AVDTCVNNGANVVTMSLGGAGS------STTERNALAAHYNNGVLLIAAAGNDGNNTHSY 305

Query: 404 GNVAPWAISVAA 415
                  +SVA+
Sbjct: 306 PASYDSVMSVAS 317