Pairwise Alignments

Query, 1287 a.a., serine protease, subtilase family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 821 a.a., Subtilisin-like serine proteases from Kangiella aquimarina DSM 16071

 Score = 51.6 bits (122), Expect = 3e-10
 Identities = 44/144 (30%), Positives = 63/144 (43%), Gaps = 26/144 (18%)

Query: 580 LADFSSRGPYKWQTELMVPH-----------IAAPGVDIYAAYADEMPFTSVNDAAPSD- 627
           L DFSSRG         +P            + APGVDI +  A     ++  DA     
Sbjct: 327 LIDFSSRGQRDETGTFTMPDGTEWTYRNEVSVVAPGVDIISTRAKTNLVSNGGDADIDAI 386

Query: 628 -------FAFLSGTSMASPHVAGSAALLRQLHPDWTPAEIQSAMMLTATTNVLKEDGKTP 680
                  +  +SGTSMA+PHVAG  AL+ + +P+ TP E +  +  TAT     E     
Sbjct: 387 ETEYLPYYTMISGTSMATPHVAGIIALMLEANPNLTPLETKRLIQETATNMPGYE----- 441

Query: 681 AGIFDIGSGRLQIDKAAQAGLVMD 704
              +++G+G +    A  A L  D
Sbjct: 442 --TWEVGAGYVNAYAAVAAALNYD 463



 Score = 38.1 bits (87), Expect = 3e-06
 Identities = 63/256 (24%), Positives = 96/256 (37%), Gaps = 61/256 (23%)

Query: 177 QLIGASNLWDGN---ATGLAAKGDGIIIGILDTGINTDNRAFSAVGDDGHNIINPLGSGN 233
           +L GA  L         G++  G G+ + + D+GI+       A  DD       L  G 
Sbjct: 117 ELTGAEKLQSDEFMQTNGISFTGKGVTVMVNDSGID-------ATHDD-------LQFGT 162

Query: 234 YLGDCVKDATLCNDKLIGVYSFPLVTDEYNGLRPANGEDYN-GHGSHTASTAAGNALVNV 292
            + + V+  T      +  +S   +  + N        D N GHG+H A T AG    + 
Sbjct: 163 KVVENVQALTHAQALSLTGFSGAWIEGQLN-------TDLNVGHGTHCAGTVAGWGTNS- 214

Query: 293 PVLMPNIGEEVGDGIETGTVLSNISGVAPHANIISY------QVCDQSGCYPSLTIASVE 346
                       DG           G AP A ++ Y       + D  G Y        +
Sbjct: 215 ------------DG--------KYKGAAPDAELVGYGSGAGLSILDALGGYDYAITHIYD 254

Query: 347 LAIKAGVDVLNYSIGPRGGVQ-NDPWNTASDIAFLSAREAGIFVAMAAGNAGPDAETVGN 405
               + + V++ S G  G  + N P + AS  A+    + G+    AAGN GP  +T   
Sbjct: 255 F--NSPIRVMSNSWGSSGKYEPNGPISVASYKAY----KLGMISVFAAGNDGPGEDTHNP 308

Query: 406 VA--PWAISVAASSHQ 419
            A  PW +SV A + Q
Sbjct: 309 YAQIPWGMSVGAGTKQ 324