Pairwise Alignments

Query, 457 a.a., transglycosylase, Slt family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 505 a.a., Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein from Kangiella aquimarina DSM 16071

 Score =  373 bits (957), Expect = e-108
 Identities = 191/430 (44%), Positives = 269/430 (62%), Gaps = 2/430 (0%)

Query: 14  LRVGTLYGPQIYMTSGQGNSGFDYDMAVLFAEYLDVPLKMVPYTNLAELYDALKKNEIDI 73
           ++V T   P       +G SGF+YD+  LFA+ L V +++V   ++A++   +     D 
Sbjct: 42  IKVYTRISPTTMYVGEEGFSGFEYDLVKLFADELGVRVQIVTENDIAKILREVSSGRADF 101

Query: 74  IAAGMTETPARREHFRLGPPLYRVNQVLVYREGMPAPKDISDLKGKITVIADSSFVETLT 133
            AAG+T T  R E  R GPP   +   LVY++G   P+D S +   +TV+A+SS  E L 
Sbjct: 102 AAAGLTVTQQREEFLRFGPPYQEITSKLVYKQGNDRPRDFSQVDKNLTVVANSSHSEELL 161

Query: 134 QLQKRHPTLVWDQVTDKDNEELLTMIANKEIDYTIADSSSVQINRRYLPVLRSGLVLEEK 193
           + QK +P L W + +D   ++LL  + +   DYTI DS+ +Q+ R+  P L     + E 
Sbjct: 162 KAQKDYPNLSWTERSDLTPQDLLDGVLDGTFDYTIVDSNELQLARQVQPELAVAFSITEP 221

Query: 194 LNVVWLLPPTHSDGLMSQLLAFWHQEKLAGTLDHLNEKYFGHVKRFDYIDTRAFLRAIET 253
             + W  P    + L  + + F+ + +  GTL +L E+Y+GH+ +FDY+  R FLRAIE 
Sbjct: 222 EPLAWAFPKDSDNSLYIKAIEFFSKIRGDGTLAYLTERYYGHLSKFDYVGNREFLRAIED 281

Query: 254 VLPRYRQHF-ETHAGDLDWRKLAATSYQESHWNPNARSPTGVRGMMMLTQPTAKEIGITN 312
            L +YR +F E  A DLDWR LAA  YQESHW P+ARSPTGVRG+MMLT  TAK++G+ N
Sbjct: 282 KLDKYRPYFYEAAANDLDWRLLAAMGYQESHWEPHARSPTGVRGLMMLTLNTAKQLGVKN 341

Query: 313 RLDAEESIRGGAAYLRDMINRLPESIPESQRMWFALASYNIGYAHVEDARKLAESMELNP 372
           RLDAE+SI GGA YLR +  ++P+ I E  R WFALA+YN+GY H+EDAR+LAE    NP
Sbjct: 342 RLDAEQSILGGADYLRLVKEKIPDRIEEPDRTWFALAAYNVGYGHLEDARRLAEGDGANP 401

Query: 373 NAWQDLKKVLPLLQKRKYYQKTRYGYARGSEAVHYVDSIRRYYDTLVWVDNQSKQQNSEE 432
           + W D+K+ LPLL+++K+Y +TRYGYARG E V YV++IR YY  L  V  + K   SE 
Sbjct: 402 DKWLDVKEYLPLLRQKKWYSRTRYGYARGDEPVKYVNNIRMYYQVLKQV-AEPKAGGSEL 460

Query: 433 VAPSDLTAEE 442
           V P   + +E
Sbjct: 461 VDPETESMQE 470