Pairwise Alignments

Query, 379 a.a., cytochrome d ubiquinol oxidase, subunit II (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 379 a.a., cytochrome d ubiquinol oxidase subunit II from Pectobacterium carotovorum WPP14

 Score =  528 bits (1360), Expect = e-154
 Identities = 246/379 (64%), Positives = 307/379 (81%)

Query: 1   MFDYEMLRVIWWALIGVLFIGFAVTDGFDMGVGALLPIIGKDDTERRIMINTIAPHWDGN 60
           MF+YE+LR IWW LIG+L IGFA+TDGFDMGVG L+ ++G+ DTERR+MIN+IAPHWDGN
Sbjct: 1   MFEYEVLRFIWWLLIGILLIGFAITDGFDMGVGILVRLMGRGDTERRVMINSIAPHWDGN 60

Query: 61  QVWLITAGGALFAAWPMVYAVSFSGFYVAMMLVLFALYMRPVGFDYRSKIENPKWRKSWD 120
           QVWLITAGGALFAAWPMVYA +FSGFY+AM+LVL +L+ RPVGFDYRSKIE+P+WR  WD
Sbjct: 61  QVWLITAGGALFAAWPMVYAAAFSGFYIAMILVLASLFFRPVGFDYRSKIEDPRWRGMWD 120

Query: 121 WALFVGGFVPPLIIGVAFGNLLQGVPFNFDEFLRATYHGGLFGLLNPFGLLAGLVSVTMF 180
           W +F+G FVPP++IGVAFGNLLQGVPF+ DE+LR  Y G  F LLNPFGLLAG+VS+TM 
Sbjct: 121 WGIFIGSFVPPVVIGVAFGNLLQGVPFHVDEYLRLYYTGNFFQLLNPFGLLAGVVSLTMI 180

Query: 181 MMQGAAWLQMKTEGELRVRAANATQLFALLVAVLFAAAGVWLANGIDGYVVTSALDHNAV 240
           + QGA +L M+T G+L VR+ +A Q+ AL++ V FA AGVW+  GIDGYVVTSA++  A 
Sbjct: 181 LTQGATYLMMRTTGDLHVRSKSAAQISALVMMVTFALAGVWVVYGIDGYVVTSAINTAAE 240

Query: 241 SNPTLKTVAVEAGAWLANYDKYPITMLFPVLGVALPLLVIVVSRLNRSGFAFLFSSLAVA 300
           SNP  K V  +AGAWL N++ +P+    P LGVALP+L  +++R  +  +AFLFSSL +A
Sbjct: 241 SNPLRKEVVHQAGAWLINFNNHPVLWAIPALGVALPVLTTLMARAEKGAWAFLFSSLTIA 300

Query: 301 MVILTCGAAMFPFVMPSSLDPNVSLTMWDATASEMTLTVMTWAAIVFVPIVLSYTVWTYF 360
            VILT G AMFPF+MPS   PNVSLT+WDAT+S +TL VMT  A++FVPIVLSYT W Y+
Sbjct: 301 CVILTAGIAMFPFIMPSVTVPNVSLTVWDATSSLLTLKVMTVVAMIFVPIVLSYTAWCYY 360

Query: 361 KMFGRLSRKHIEDNKASLY 379
           KMFGR++++ IE N  S+Y
Sbjct: 361 KMFGRITKEQIEQNTHSMY 379