Pairwise Alignments

Query, 224 a.a., flagellar L-ring protein FlgH (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 232 a.a., flagellar basal body L-ring protein FlgH from Serratia liquefaciens MT49

 Score =  130 bits (327), Expect = 2e-35
 Identities = 83/226 (36%), Positives = 119/226 (52%), Gaps = 15/226 (6%)

Query: 3   RYLLLAAALLLTACSSTPKKPIADDPFYAPVYPEAPPTKIAATGSIYQDSQAAS-----L 57
           R+L     L L+ C+  P KP+ D    A   P   P      GSI+Q  Q  +     L
Sbjct: 9   RWLAAMVMLTLSGCAYIPHKPLVDGATTAQPAPAGAPVP---NGSIFQTVQPMNYGYQPL 65

Query: 58  YSDIRAHKVGDIITIVLKEATQAKKSAG-NQIKKGSD---MTLDPVYAGGSNLSLGGIPL 113
           + D R   VGD +TIVL+E   A KS+  N  + G+    +   P Y  G    LG    
Sbjct: 66  FEDRRPRNVGDTLTIVLQENVSASKSSSANASRNGASKFGVATSPRYLDGL---LGNARA 122

Query: 114 DLRYKDSMNTKRESDADQSNSLDGSISANIMQVLNNGNLVVRGEKWISINNGDEFIRVTG 173
           D+          +  A+ +N+ +G+I+  + QVL NGNL V GEK I+IN G EFIR +G
Sbjct: 123 DMDISGDSTFGGKGGANANNTFNGTITVTVNQVLVNGNLHVVGEKQIAINQGTEFIRFSG 182

Query: 174 IVRSQDIKPDNTIDSTRMANARIQYSGTGTFAEAQKVGWLSQFFMS 219
           +V  + I   N++ ST++A+ARI+Y G G   EAQ +GWL +FF++
Sbjct: 183 VVNPRTISGSNSVTSTQVADARIEYVGNGYINEAQTMGWLQRFFLN 228