Pairwise Alignments

Query, 224 a.a., flagellar L-ring protein FlgH (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 238 a.a., flagellar basal body L-ring protein FlgH from Dickeya dadantii 3937

 Score =  124 bits (310), Expect = 2e-33
 Identities = 80/226 (35%), Positives = 115/226 (50%), Gaps = 15/226 (6%)

Query: 3   RYLLLAAALLLTACSSTPKKPIADDPFYAPVYPEAPPTKIAATGSIYQDSQAAS-----L 57
           R L     L L+ C+  P   +   P  A     APP +    GSI+Q  QA +     +
Sbjct: 15  RLLAYVMMLTLSGCAYIPHDKVVTGPTTAQ---PAPPLQAIPNGSIFQTGQAMNYGYQPM 71

Query: 58  YSDIRAHKVGDIITIVLKEATQAKKSAGNQIKKGSD----MTLDPVYAGGSNLSLGGIPL 113
           + D R   VGD +TIVL+E   A KS+     + +     MT  P    G  L       
Sbjct: 72  FEDRRPRNVGDTLTIVLQENVSASKSSSANASRDASGSFGMTTTPRLLEGP-LGNNRAAF 130

Query: 114 DLRYKDSMNTKRESDADQSNSLDGSISANIMQVLNNGNLVVRGEKWISINNGDEFIRVTG 173
           +   KD    K    A+ +N+  G+I+  + QVL NGNL V GEK I++N G EFIR +G
Sbjct: 131 NATGKDDFTGK--GGANANNTFTGTITVTVDQVLTNGNLHVVGEKQIAVNQGTEFIRFSG 188

Query: 174 IVRSQDIKPDNTIDSTRMANARIQYSGTGTFAEAQKVGWLSQFFMS 219
           +V  + I   NT+ ST++A+AR++Y G G   E Q +GWL +FF++
Sbjct: 189 VVNPRTISGSNTVPSTQVADARMEYVGNGYINETQTMGWLQRFFLN 234