Pairwise Alignments

Query, 272 a.a., flagellin (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 272 a.a., flagellin domain-containing protein from Paraburkholderia sabiae LMG 24235

 Score =  186 bits (473), Expect = 4e-52
 Identities = 107/272 (39%), Positives = 163/272 (59%), Gaps = 4/272 (1%)

Query: 3   ITVNTNVTSLKAQKNLNTSASDLATSMERLSSGLRINSAKDDAAGLAISNRLNSQVRGLE 62
           + +NTN+ SL AQ NL+ S S L+ ++ RLSSG R+N+A DDAAGLAIS    + +  L 
Sbjct: 2   LNINTNIMSLTAQNNLSGSQSALSQAISRLSSGKRVNTAADDAAGLAISTTQTASINALT 61

Query: 63  VGMRNANDAISIAQIAEGAMQEQTNMLQRMRDLTVQSENGANSSADLSALKAEMDQLANE 122
            G  NAN+ IS+ Q   GA++   + LQR+R L V++ +G+  SA L+ L++E+     E
Sbjct: 62  QGASNANNGISMVQTTNGALKSVVDNLQRIRQLAVEAGDGSLDSAALANLQSEVATRLTE 121

Query: 123 IDEIGKTTAFGTTKLLAGGFSAGKNFQVGAQDGEDIKVTVKAS--NKSSLSVGSLGNTTS 180
           I  + + T F    +L G  S   NFQ+GA D + I     +   + SSL +  L  +T+
Sbjct: 122 ITRVAQQTTFNGQSVLNGIGSV--NFQIGAFDAQQITADFGSQKWDASSLGISGLSVSTA 179

Query: 181 AARASSLKKIDAAIKTIDAQRADLGAIQNRLAHNISNSANTQANVADAKSRIVDVDFAKE 240
           +   +++  ID+ + +++  +A LGA QN     IS +     N++ A+S+I D DFA E
Sbjct: 180 SGAQAAMSTIDSVLTSVNTFQATLGATQNTFQAAISTTNTQATNMSSARSQITDADFATE 239

Query: 241 TSQMTKNQVLQQTGSAMLAQANQLPQVALSLL 272
           T+ ++K QVLQQ G ++LAQAN +PQ  L LL
Sbjct: 240 TANLSKAQVLQQAGISVLAQANSMPQSVLKLL 271