Pairwise Alignments

Query, 272 a.a., flagellin (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 280 a.a., flagellin from Dickeya dianthicola ME23

 Score =  205 bits (521), Expect = 1e-57
 Identities = 116/276 (42%), Positives = 174/276 (63%), Gaps = 8/276 (2%)

Query: 5   VNTNVTSLKAQKNLNTSASDLATSMERLSSGLRINSAKDDAAGLAISNRLNSQVRGLEVG 64
           +NTN  SL AQ NLN S S L T++ERLSSGL INSAKD+AAG  I N + +Q++GL   
Sbjct: 4   INTNSMSLLAQTNLNKSQSSLQTAIERLSSGLAINSAKDNAAGSGIVNGMTAQIKGLTQA 63

Query: 65  MRNANDAISIAQIAEGAMQEQTNMLQRMRDLTVQSENGANSSADLSALKAEMDQLANEID 124
            +NAND +S+ Q AEG +    + LQR+R+L VQ+ N  N + D +A++ E+++  +EI+
Sbjct: 64  SKNANDGVSLVQTAEGNLDTINDNLQRIRELAVQAANDTNGTNDRTAIQTEINRRVDEIN 123

Query: 125 EIGKTTAFGTTKLLAGGFSA-GKNFQVGAQDGEDIKVTVKASNKSSLSVGSLGNT----- 178
            +  +  F    LL G  +A G N QVG+    +  ++V ++   + + G LG T     
Sbjct: 124 RVAASANFNGKALLDGTVNATGFNIQVGSGTTANDAISVGSAALINATSGGLGITTTNTD 183

Query: 179 --TSAARASSLKKIDAAIKTIDAQRADLGAIQNRLAHNISNSANTQANVADAKSRIVDVD 236
             T+A   + +  ID A++TI+  +A++GA  NR    I N +NT  N+++A+SRI D D
Sbjct: 184 VSTAAGSTALVSAIDTALQTINTAKANIGATLNRFQSTIDNLSNTINNLSNARSRIQDAD 243

Query: 237 FAKETSQMTKNQVLQQTGSAMLAQANQLPQVALSLL 272
           +A E S M++ Q+LQQ G+++LAQANQ+PQ  L LL
Sbjct: 244 YATEVSNMSRAQILQQAGTSVLAQANQVPQTVLKLL 279