Pairwise Alignments

Query, 456 a.a., flagellar hook-associated protein FliD (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 471 a.a., Flagellar hook-associated protein 2 from Escherichia fergusonii Becca

 Score =  174 bits (442), Expect = 4e-48
 Identities = 140/470 (29%), Positives = 234/470 (49%), Gaps = 30/470 (6%)

Query: 2   AISATGMGSGLDISNIVKVLVDAEKAPKEAMFNKTEDSIKAKVSAMGTLKSALSTFQDAV 61
           +IS  G+GSGLD+S+I+  L  AEK+    + +K + S  AK+SA GTLKSAL +FQ A 
Sbjct: 3   SISTLGVGSGLDLSSILDSLEAAEKSTLTPI-SKQQSSYTAKLSAYGTLKSALESFQTAN 61

Query: 62  KKLQTGDALNQRKISVSTDAYLSAKAEKTAQAGSYGIKVEQVATNHKIAGTNVA-DATQP 120
             L   D       + S+ A+ SA    +A AG Y I V Q+A    +   N   D+   
Sbjct: 62  TALNKADLFTATSTTSSSSAF-SATTTGSAIAGKYTISVSQLAQAQTLTTKNSQKDSKAA 120

Query: 121 VGEGSLAFGVN---GKS-FSVDIAA-TDSLAEIAKKVNEASDNVGVTATVITSDAGS-RL 174
           +        +    GK   ++DI+A   SL+ I   +N A    GV+A++I    G  RL
Sbjct: 121 IATSDSVLTIQQGGGKDPVTIDISAGNSSLSGIRDAINNAK--AGVSASIINVGNGEYRL 178

Query: 175 VFSANKTGEDNQISLTATNTSG----SGVTDMFGSGNTSTLQD--AKNAVLYIDGQKVTS 228
             +AN TG DN + L+ +  S      G     G  +   ++   A+NA L ++  ++ +
Sbjct: 179 SITANDTGSDNAMKLSVSGDSALESFMGYNGTPGDSSNGMIESVTAQNAKLTVNNVEIEN 238

Query: 229 QSNEVKNAITGVTLNLTNADVAKTTTVKIEQDNEAVKTNVQAFVDAYNSLVTTIDKMSSY 288
            SN + +++  +TLNL +      T + I +D    +  V+A+VDAYN+L  T   ++ Y
Sbjct: 239 SSNTISDSLEDITLNLNDVTTGNQT-LTISKDTSKAENAVKAWVDAYNTLQDTFSSLTKY 297

Query: 289 -------DKDKKTAAALQGDSMIRSIESQLRSVASGRVPTADGGSIALYDIGIKADRY-G 340
                  +    +  AL GDS +R+I++QL+++ +    +++  ++A   IGI +D   G
Sbjct: 298 TAVDAGAESQDSSNGALLGDSTLRTIQTQLKTLLANTHSSSNYKTLA--QIGITSDASTG 355

Query: 341 KLSVDDTKLNKALTEDMSSVEALFATPDK--GLANRFNDLANSYVKSSGLIADRQSSYTT 398
           KL +   KL  AL  D + +  +F    K  G+    +    S++ S+G+I   +   + 
Sbjct: 356 KLEIATDKLQTALKNDAAGIGEMFIGDGKSTGVTTGISSNLTSWLSSTGIIQAAKDGVSK 415

Query: 399 QQSRLADQRAAFTLKMDQLTARLTKQFNAMDLVVGKLNQQSSGLVDRLNS 448
             + L DQ  A + ++D L  R   QF  +D+++  LN  SS L  + ++
Sbjct: 416 TLNNLTDQYNAASERIDTLMTRYKAQFTQLDVLMNSLNSTSSYLTQQFDT 465