Pairwise Alignments

Query, 553 a.a., flagellar M-ring protein FliF (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 552 a.a., flagellar M-ring protein (NCBI) from Escherichia coli BW25113

 Score =  228 bits (580), Expect = 6e-64
 Identities = 165/551 (29%), Positives = 281/551 (50%), Gaps = 45/551 (8%)

Query: 25  QITMILALAICLALAVFVMIWAQEPEYRPL-GKMETQEMVQVLDVLDKNKIKYQIDV--D 81
           +I +I+A +  +A+ V +++WA+ P+YR L   +  Q+   ++  L +  I Y+      
Sbjct: 22  KIPLIVAGSAAVAVMVALILWAKAPDYRTLFSNLSDQDGGAIVSQLTQMNIPYRFSEASG 81

Query: 82  VVKVPEDKYQEVKMMLSRAGIDSAATSKQDFLTQDSGFGVSQRMEQARLKHSQEENLARA 141
            ++VP DK  E+++ L++ G+        + L Q+  FG+SQ  EQ   + + E  L+R 
Sbjct: 82  AIEVPADKVHELRLRLAQQGLPKGGAVGFELLDQEK-FGISQFSEQVNYQRALEGELSRT 140

Query: 142 IEQLQSVSRAKVILALPKENVFARNTAQPSATVVINTRRG-GLGQGEVDAIVDIVASAVQ 200
           IE +  V  A+V LA+PK ++F R    PSA+V +N   G  L +G++ AIV +V+SAV 
Sbjct: 141 IETIGPVKGARVHLAMPKPSLFVREQKSPSASVTVNLLPGRALDEGQISAIVHLVSSAVA 200

Query: 201 GLEPSRVTVTDSNGRLLNSGSQDGVSARARRELELVQQKETEYRT--KIDSILSPILGHD 258
           GL P  VT+ D  G LL   +Q   S R   + +L    + E R   +I++ILSPI+G+ 
Sbjct: 201 GLPPGNVTLVDQGGHLL---TQSNTSGRDLNDAQLKYASDVEGRIQRRIEAILSPIVGNG 257

Query: 259 NFTSQVDVSMDFTAVEQTAKRFNPD----LPSLRSEMTVENNSTG-GSTGGIPGALSNQP 313
           N  +QV   +DF + EQT +++ P+      +LRS    E+  +G G  GG+PGALSNQP
Sbjct: 258 NIHAQVTAQLDFASKEQTEEQYRPNGDESHAALRSRQLNESEQSGSGYPGGVPGALSNQP 317

Query: 314 PMESNIP------------QEAATAATESVAAGNSHREATRNFELDTTISHTRQQIGVVR 361
              +N P            Q+A+T  T +    ++ R  T N+E+D TI HT+  +G V+
Sbjct: 318 APANNAPISTPPANQNNRQQQAST--TSNSGPRSTQRNETSNYEVDRTIRHTKMNVGDVQ 375

Query: 362 RVSVSVAVDFKPGAAGENGQVARVARTEQELTNIRRLLEGAVGFSAQRGDVLEVVTVPFM 421
           R+SV+V V++K    G+      +  + +++  I  L   A+GFS +RGD L VV  PF 
Sbjct: 376 RLSVAVVVNYKTLPDGKP-----LPLSNEQMKQIEDLTREAMGFSEKRGDSLNVVNSPFN 430

Query: 422 DQLVEDVPAPELWEQPWFWRAVKLGVGALVILVLILAVVRPMLKRLIYPDRVNMPEDGRL 481
                    P   +Q +  + +  G   LV+LV  L     + ++ + P      E  + 
Sbjct: 431 SSDESGGELPFWQQQAFIDQLLAAGRWLLVLLVAWL-----LWRKAVRPQLTRRAEAMKA 485

Query: 482 GNELAEIEDQYAADTLGMLNTKEAEYSYADDGSILIPNLHKDDDMIKAIRALVANEPELS 541
             + A+  ++   D + +  +K+ +         L   +     M + IR +  N+P + 
Sbjct: 486 VQQQAQAREE-VEDAVEVRLSKDEQLQQRRANQRLGAEV-----MSQRIREMSDNDPRVV 539

Query: 542 TQVVKNWLQDN 552
             V++ W+ ++
Sbjct: 540 ALVIRQWINND 550