Pairwise Alignments

Query, 343 a.a., flagellar motor switch protein FliM (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 337 a.a., flagellar motor switch protein FliM from Pectobacterium carotovorum WPP14

 Score =  239 bits (610), Expect = 7e-68
 Identities = 118/315 (37%), Positives = 194/315 (61%), Gaps = 5/315 (1%)

Query: 4   LLSQDEIDALLHGVDDVEEDNELDAVGQE---ARSYDFSSQDRIVRGRMPTLEIVNERFA 60
           +LSQ EIDALL+G D  + D + +A  +     + YD ++Q R++R R+  LEI+NERFA
Sbjct: 5   ILSQAEIDALLNG-DSGDSDADANASSKADGGVKPYDPNTQRRVIRERLQALEIINERFA 63

Query: 61  RHLRISMFNMMRRAAEVSINGVQMLKFGEYVHTLFVPTSLNMVRFHPLKGTALITMEARL 120
           R  R+ +FN++RR+ ++++  +++  + E+   L VPT+LN++   PL+GTAL      L
Sbjct: 64  RQFRMGLFNLLRRSPDITVGAIKIQPYHEFARNLPVPTNLNLIHLKPLRGTALFVFSPSL 123

Query: 121 VFILVDNFFGGDGRFHAKIEGREFTPTERRIVQLLLKIIFEDYKDAWAPVMDVEFDYLDS 180
           VFI VDN FGGDGRF  K+EGREFT TE+R+V+ +L++  E Y +AW  +  ++ +Y+ S
Sbjct: 124 VFIAVDNLFGGDGRFPTKVEGREFTHTEQRVVKRMLRLALEAYGEAWNAIYKLDIEYVRS 183

Query: 181 EVNPAMANI-VSPTEVVVINSFHIEVDGGGGDFHITMPYSMIEPIRELLDAGVQSDKQDT 239
           E+     NI  SP ++VV   FH+E+    G+F+I +P+SMIEP+RELL      + +  
Sbjct: 184 EMQVKFTNITTSPNDIVVTTPFHVEIGSLTGEFNICIPFSMIEPLRELLANPPLENSRQE 243

Query: 240 DMRWSQALHDEIMDVKVGFDATVVEHELTLKDVMNFKAGDIIPIELPEYIMMRIEDLPTY 299
           D  W   L  ++   ++   A+ V+  L L  ++  + GD++PI+ P+ I+  ++ +P  
Sbjct: 244 DQSWRDTLAKQVQHSELELVASFVDIPLRLSKILKLQPGDVLPIDKPDKIVAHVDGVPVL 303

Query: 300 RCKMGRSRDNLALKI 314
             + G      AL++
Sbjct: 304 TSQYGTLNGQYALRV 318