Pairwise Alignments

Query, 343 a.a., flagellar motor switch protein FliM (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 393 a.a., flagellar motor switch protein FliM from Magnetospirillum magneticum AMB-1

 Score =  155 bits (392), Expect = 2e-42
 Identities = 95/326 (29%), Positives = 170/326 (52%), Gaps = 14/326 (4%)

Query: 4   LLSQDEIDALLHGVDDVEEDNELDAVGQEARSYDFSSQDRIVRGRMPTLEIVNERFARHL 63
           +L+QDEID+LL   DD+   N+   +     S   S +      R+P LE+V +R  R +
Sbjct: 78  VLNQDEIDSLLGFDDDMGGANDKSGIQAILNSALVSYE------RLPMLEVVFDRLVRMM 131

Query: 64  RISMFNMMRRAAEVSINGVQMLKFGEYVHTLFVPTSLNMVRFHPLKGTALITMEARLVFI 123
             SM N      EVS++ +  L+FG+Y++++ +P  L + +        L+T+++ L++ 
Sbjct: 132 STSMRNFTSDNVEVSLDNILSLRFGDYLNSIPLPAMLAVFKAEEWDNFGLLTVDSSLIYS 191

Query: 124 LVDNFFGGD-GRFHAKIEGREFTPTERRIVQLLLKIIFEDYKDAWAPVMDVEFDYLDSEV 182
           +VD   GG  G    +IEGR +T  ER +V+ ++ ++  D   A+ P+  V F +   E 
Sbjct: 192 IVDVLLGGRRGTAAMRIEGRPYTTIERNLVERMVHVVLSDLSAAFDPLSPVTFRFDRLET 251

Query: 183 NPAMANIVSPTEVVVINSFHIEVDGGGGDFHITMPYSMIEPIRELLDAGVQSDKQDTDMR 242
           NP  A I  P+   ++    I+++  GG   + +PY+ +EP+RELL      +K   D  
Sbjct: 252 NPRFATISRPSNAAIVAKLRIDMEDRGGRLELLLPYATLEPVRELLLQMFMGEKFGRDSI 311

Query: 243 WSQALHDEIMDVKVGFDATVVEHELTLKDVMNFKAGD--IIPIELPEYIMMRIEDLPTYR 300
           W   L +E+   +V  +A + E  + L++V+N+K G   ++       I MR  ++  +R
Sbjct: 312 WETHLAEELWLTEVELEAVLDEQVMNLREVLNWKPGSKFMLNATADSQIDMRCGEVAMFR 371

Query: 301 CKMGRSRDNLALKIYEKIPRPETVKS 326
            +MGR   ++A+++ E      T+KS
Sbjct: 372 GRMGRKGQHIAIQVDE-----STIKS 392