Pairwise Alignments

Query, 343 a.a., flagellar motor switch protein FliM (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 347 a.a., flagellar motor switch protein FliM from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  151 bits (382), Expect = 2e-41
 Identities = 94/318 (29%), Positives = 164/318 (51%), Gaps = 17/318 (5%)

Query: 4   LLSQDEIDALLH---GVDDVEEDNELDAVGQEAR-SYDFSSQDRIVRGRMPTLEIVNERF 59
           +L+QDEID+LL    G DD  E + + A+   A  SY+          R+P LEIV +R 
Sbjct: 24  VLNQDEIDSLLGFDLGDDDGSERSGIRAIINSALVSYE----------RLPMLEIVFDRL 73

Query: 60  ARHLRISMFNMMRRAAEVSINGVQMLKFGEYVHTLFVPTSLNMVRFHPLKGTALITMEAR 119
            R +  S+ N      EVS++ +  ++FG+Y++++ +P  L + R   L    L+T+++ 
Sbjct: 74  VRLMTTSLRNFTSDNVEVSLDNISSIRFGDYLNSIPLPAILAVFRAEELDNYGLLTVDSN 133

Query: 120 LVFILVDNFFGGD-GRFHAKIEGREFTPTERRIVQLLLKIIFEDYKDAWAPVMDVEFDYL 178
           L++ +VD   GG  G    +IEGR +T  ER +VQ +++++  D + A+ P+  V F+  
Sbjct: 134 LIYSIVDVLLGGRRGTAALRIEGRPYTTIERVLVQRMVEVVLNDARQAFEPLTPVHFNLD 193

Query: 179 DSEVNPAMANIVSPTEVVVINSFHIEVDGGGGDFHITMPYSMIEPIRELLDAGVQSDKQD 238
             E NP  A I  P    ++    I+++  GG   + +PY+ +EPIR++L      +K  
Sbjct: 194 RLETNPRFAAIARPANAAILIKLRIDMEDRGGRIELLLPYATLEPIRKMLLQQFMGEKFG 253

Query: 239 TDMRWSQALHDEIMDVKVGFDATVVEHELTLKDVMNFKAGDIIPIEL--PEYIMMRIEDL 296
            D  W   L  EI   +    A + E ++ L  V+N K GD + +       + +R   +
Sbjct: 254 RDNIWEGHLATEIWTTETEVRAVLDEQQMPLSSVLNLKVGDTMMLNATPDSEVSIRAGSI 313

Query: 297 PTYRCKMGRSRDNLALKI 314
           P    +MGR   ++A+++
Sbjct: 314 PLTTGRMGRKGQHIAIRV 331