Pairwise Alignments

Query, 124 a.a., flagellar motor switch protein FliN (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 152 a.a., Flagellar motor switch protein FliN from Pseudomonas sp. RS175

 Score =  141 bits (356), Expect = 3e-39
 Identities = 80/138 (57%), Positives = 97/138 (70%), Gaps = 18/138 (13%)

Query: 5   DDWAAAM----------------AEQALEEANAVGLDEL--VDDSQPISKAEAAKLDTIL 46
           D+WAAA+                A+     +N + ++E   V  S      +   LD IL
Sbjct: 15  DEWAAALEEAGESGQADIDALLAADTGAAASNRLPMEEFGSVPKSHEPVTLDGPNLDVIL 74

Query: 47  DIPVTISMEVGRSFISIRNLLQLNQGSVVELDRVAGEPLDVMVNGTLIAHGEVVVVNDKF 106
           DIPV+ISMEVG + I+IRNLLQLNQGSV+ELDR+AGEPLDV+VNGTLIAHGEVVVVN+KF
Sbjct: 75  DIPVSISMEVGSTDINIRNLLQLNQGSVIELDRLAGEPLDVLVNGTLIAHGEVVVVNEKF 134

Query: 107 GIRLTDVISQTERIKKLK 124
           GIRLTDVIS +ERIKKL+
Sbjct: 135 GIRLTDVISPSERIKKLR 152