Pairwise Alignments

Query, 699 a.a., flagellar biosynthesis protein FlhA (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 703 a.a., flagellar biosynthesis protein FlhA from Magnetospirillum magneticum AMB-1

 Score =  540 bits (1392), Expect = e-158
 Identities = 284/679 (41%), Positives = 441/679 (64%), Gaps = 5/679 (0%)

Query: 21  IGTPLLVLAALAMIVLPIPPFLLDILFSFNIALALVVLLVAIYTDRPLDFAAFPTVLLVA 80
           +G    ++  + M++LP+PP+LLDI  + ++ +A+++L+VAI+ ++PL F++FPTVLL+ 
Sbjct: 28  VGLAFGIIVIVMMLILPLPPWLLDIGLALSLTIAVLILMVAIFIEKPLQFSSFPTVLLLT 87

Query: 81  TLLRLALNVASTRVVLLEGHNGGDAAGKVIEAFGSVVIGGNYAVGVVVFIILIIINFAVV 140
           TL+RLALN+ASTR++L  GH G + AG+VI AF S ++ G++ +G++VF IL+I+NF V+
Sbjct: 88  TLIRLALNLASTRLILSHGHEGVEGAGQVIAAFASFIMSGSFVIGIIVFAILVIVNFVVI 147

Query: 141 TKGAGRIAEVSARFTLDAMPGKQMAIDADLNAGIINQDQARTRRAEVTREADFYGAMDGA 200
           TKG+ RIAEV+ARFTLDAMPGKQMAIDADL+AG+ ++  AR RRAE+  E+ F+GAMDGA
Sbjct: 148 TKGSTRIAEVAARFTLDAMPGKQMAIDADLSAGLCDEPTARKRRAELEGESAFFGAMDGA 207

Query: 201 SKFVKGDAIAGIMILVINILGGFIIGIVQHGLTFAQAAEIYTLLTIGDGLVAQIPGLLLS 260
           SKFV+GDA+AG+MI  IN++GG IIG+ Q GLTF+QAAE YT LT+GDGLV Q+P L++S
Sbjct: 208 SKFVRGDAVAGLMITAINVIGGMIIGMAQQGLTFSQAAEFYTKLTVGDGLVTQVPALIVS 267

Query: 261 IAAALMVTRQNESGDMGQMLMSQMFDSHKSLGIAAGVLFVMGIVPGMPHMAFLSFAVMTG 320
           ++A ++VT+      + + L SQ+    +++G+A  ++ +M +VP MP + F    +  G
Sbjct: 268 VSAGMLVTKAGVQEAVDRALFSQLAGYPRAVGMAGALMTLMALVPNMPFLPFFLLGLGMG 327

Query: 321 GAAYFVFKRNEAKRAKALEQVKTGPTERTEREP-KELSWDDVHHVDTIGLEVGYRLIPLV 379
            +AY +   +  +RAKA +Q +    E  ++ P  E        +D + LE+GY L+ L+
Sbjct: 328 ASAYLL---DRDQRAKAEQQQQAEVAEAMQQAPVPEEPISSALKIDHVRLELGYGLLQLI 384

Query: 380 DKGQGGELLSRIKGVRKKLSQELGFLVPAVHIRDNLDLSPNAYRISLMGVVVGEADIRHD 439
           +  +G  L  +IK +R+ ++ E+GF++P+V I+DN+ L  N Y I +  V  G  D+R  
Sbjct: 385 NTPKGQRLTDQIKSLRRAIATEMGFVMPSVRIQDNMQLPANTYVIHVKEVEAGRGDLRPA 444

Query: 440 CELAINPGQVYGKLDGIETRDPAFGLEAVWIAPELREHAQTLGYTVVDAATVVATHISQI 499
             L ++P      L G +TR+P FGL A+WI P  RE A   GYTVVD  TV+ TH++++
Sbjct: 445 ALLIMDPRGEDITLPGEKTREPTFGLPAMWIDPTNREEALFRGYTVVDPPTVITTHLTEV 504

Query: 500 LTNNAAKLLGYEEAQQLMDMLAKHSPKLVDGFIPDVMPLGNVVKVMQNLLNEGVSVRDLR 559
           + +N ++LL + E Q+L+D L K   KL+   IP  M +G + +V+QNLL E +S+RDL 
Sbjct: 505 IKDNMSELLSHAETQKLLDELDKEHQKLIAELIPSQMTIGGLQRVLQNLLGERISIRDLP 564

Query: 560 TIVQTLLEYGTKSNDTEVLTAAVRIALKRMIVQEISGPELEIPVITLAPELEQMLHQSMQ 619
           TI++ + E    + +  ++T  VR  L R I    +GP+  IP+ITL+PE EQ   +S+ 
Sbjct: 565 TILEGIAEACGHTRNVTMITEHVRARLARQISDNNTGPQGFIPLITLSPEWEQAFAESLV 624

Query: 620 ATGGDGP-NIEPGLAERMQQSLADAAQKQEMVGQPAILLTSGMLRATLSRFVKYTIPNLR 678
            TG +   ++ P   +          ++  M G+  ILLTS M+R  +   V+   P   
Sbjct: 625 GTGEEKQISMAPSQLQDFISRTRQTFERFAMQGETPILLTSPMVRPYVRSIVERFRPMTV 684

Query: 679 VISYQEIPDEKQIRIVSAV 697
           V+S  EI  + +I+ +  +
Sbjct: 685 VMSQSEIHPKARIKTLGQI 703