Pairwise Alignments

Query, 166 a.a., transcriptional activator rfaH, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 162 a.a., transcription/translation regulatory transformer protein RfaH from Dickeya dianthicola 67-19

 Score = 91.3 bits (225), Expect = 7e-24
 Identities = 51/152 (33%), Positives = 81/152 (53%), Gaps = 4/152 (2%)

Query: 1   MKAWYLLYCKPRSEVRAQQNLALQNLETYLPMVSEEKSQRGQKRICRVPLFPNYLFINFD 60
           M+AWYLLYCK    +RA+++L  Q +    PM++ EK  RG++     PLFPNYLF+ FD
Sbjct: 1   MRAWYLLYCKRGQLLRAKEHLERQEVVCLSPMIALEKIVRGKRTEVSEPLFPNYLFVEFD 60

Query: 61  PSQTSVKQVHSTRGVSRIVNCQEKMTPIDDRIIHAIRMKELTPSQSVLDTPLELKTGEKI 120
           P       + STRGVS  V        +  ++I  ++     P    +D P   + G+++
Sbjct: 61  PEHIHTTTISSTRGVSHFVRFGNLPALVPQQVIDDLQQH---PCAMHID-PETPQPGDEV 116

Query: 121 RFKDGPFADLEAIFQEKCPNKRCHVLFNIMGQ 152
              +G F+ L+AI+ E     R  +L N++ +
Sbjct: 117 TITEGVFSGLQAIYTEPDGEARSMLLLNLLNK 148